RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 CD300LFQ8TDQ1 290 aa10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR2A7Q96R45 310 aa10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 THAP7Q9BT49 309 aaPredicted RBP10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 PLEKHA2Q9HB19 425 aa10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 SLC2A9Q9NRM0 540 aa10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 PKD1L1Q8TDX9 2849 aa10.58□□□□□ -0.72
SOX2-OT-229ENST00000598474 MSGN1A6NI15 193 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 CREBL2O60519 120 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 APELAP0DMC3 54 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 NQO2P16083 231 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 ETV6P41212 452 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 RAB9AP51151 201 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 TMEM65Q6PI78 240 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 MMD2Q8IY49 270 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 ZNF491Q8N8L2 437 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
SOX2-OT-229ENST00000598474 DISC1C4P0D8 188 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 PF4P02776 101 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 IL6RP08887 468 aaPredicted RBP10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 PTBP1P26599 531 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 S100GP29377 79 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 SLC6A1P30531 599 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 LPAR6P43657 344 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 RND3P61587 244 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 DEFB136Q30KP8 78 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 Q8N402 240 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR5M8Q8NGP6 311 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR13C8Q8NGS7 320 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 C4orf3Q8WVX3 66 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 ZNF486Q96H40 463 aaPredicted RBP10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 PHB2Q99623 299 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 AIFM2Q9BRQ8 373 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 TMEM140Q9NV12 185 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 BET1LQ9NYM9 111 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 CMYA5Q8N3K9 4069 aa10.56□□□□□ -0.72
SOX2-OT-229ENST00000598474 TRAV3A0A0B4J244 114 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 A0A1B0GW64 132 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 TEX22C9J3V5 150 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 E7EUB6 86 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 MPPED1O15442 326 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 ACTL6BO94805 426 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 MYOD1P15172 320 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 RPA2P15927 270 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 PIGPP57054 158 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 RPL8P62917 257 aaKnown RBP10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 KLF9Q13886 244 aaPredicted RBP10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 SPANXN2Q5MJ10 180 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR51S1Q8NGJ8 323 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR4A5Q8NH83 315 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 UBE2E2Q96LR5 201 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 TMEM68Q96MH6 324 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 MS4A10Q96PG2 267 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 P2RX4Q99571 388 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 SRRQ9GZT4 340 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 HRASLSQ9HDD0 168 aa10.55□□□□□ -0.72
SOX2-OT-229ENST00000598474 A6NHS1 94 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 I3L521 148 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 UPK2O00526 184 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 KRASP01116 189 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 CTSDP07339 412 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 HLA-GP17693 338 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 MAS1LP35410 378 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 G6PCP35575 357 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 MRPL41Q8IXM3 137 aaKnown RBP10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 LINC00482Q8N8I6 264 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 ADAD2Q8NCV1 583 aaKnown RBP10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 WFDC9Q8NEX5 89 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 OR5B12Q96R08 314 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 TP53RKQ96S44 253 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 SPIN2AQ99865 258 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 PRRT1Q99946 306 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 SPIN2BQ9BPZ2 258 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 FAM212BQ9NTI7 297 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 SLC2A8Q9NY64 477 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 VSIG4Q9Y279 399 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 NBEAL1Q6ZS30 2694 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
SOX2-OT-229ENST00000598474 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 H0Y980 276 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 H3BUA1 57 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 CCL24O00175 119 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 TRGV3P03979 118 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 MYCNOSP40205 109 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 ECI1P42126 302 aa10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 RPL27AP46776 148 aaKnown RBP10.53□□□□□ -0.72
SOX2-OT-229ENST00000598474 TPPP2P59282 170 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms