RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 KLK9Q2XQG4 91 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 OR4A5Q8NH83 315 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 KCTD12Q96CX2 325 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 RSRP1Q9BUV0 290 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 SLC5A7Q9GZV3 580 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 SLC2A9Q9NRM0 540 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 BET1LQ9NYM9 111 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 KLK9Q9UKQ9 250 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 PRH1P02810 166 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 IL6RP08887 468 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 ZNF735P0CB33 412 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 CATR1Q13166 79 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 RPEL1Q2QD12 228 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 SPAG16Q8N0X2 631 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 BORCS5Q969J3 196 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 IFT46Q9NQC8 304 aa13.68□□□□□ -0.22
CHMP2A-203ENST00000597209 HMX3A6NHT5 357 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 A8MZ25 164 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 H0Y980 276 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 TNFSF12O43508 249 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 HPRT1P00492 218 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 CRYGCP07315 174 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 NAT1P18440 290 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 TAS2R31P59538 309 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 TAS2R20P59543 309 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 LSM3P62310 102 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 RPL8P62917 257 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 POU2AF1Q16633 256 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 TMEM69Q5SWH9 247 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 SBSPONQ8IVN8 264 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 Q8N1Y9 231 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 CD300LFQ8TDQ1 290 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 CMTM3Q96MX0 182 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 PEMTQ9UBM1 199 aa13.67□□□□□ -0.22
CHMP2A-203ENST00000597209 A0A1B0GW64 132 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 E7EUB6 86 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 BMPR1BO00238 502 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 CSN3P07498 182 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 FGF2P09038 288 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 FRMD6-AS1P0C7T7 363 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 MECP2P51608 486 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 FXYD4P59646 89 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 ZNF818PQ6ZRF7 136 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 SSX9Q7RTT3 188 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 ADAM30Q9UKF2 790 aa13.66□□□□□ -0.22
CHMP2A-203ENST00000597209 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 DPPA5A6NC42 116 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 SULT1C2O00338 296 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 OR2J3O76001 311 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 FCER2P06734 321 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 NQO2P16083 231 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 HLA-GP17693 338 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 PSMB6P28072 239 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 GNRHRP30968 328 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 PRSS3P35030 304 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 HERV-K104P61576 105 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 C15orf32Q32M92 178 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 OR2K2Q8NGT1 345 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 FYTTD1Q96QD9 318 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 PLEKHA2Q9HB19 425 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 EHFQ9NZC4 300 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 DMRT1Q9Y5R6 373 aa13.65□□□□□ -0.22
CHMP2A-203ENST00000597209 DHFRP00374 187 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 HIST1H1BP16401 226 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 CTRB1P17538 263 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 TAS2R46P59540 309 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 TMEM17Q86X19 198 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 Q8N402 240 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 FANCD2OSQ96PS1 177 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 FUNDC2Q9BWH2 189 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 FBXL7Q9UJT9 491 aa13.64□□□□□ -0.23
CHMP2A-203ENST00000597209 CGB1A6NKQ9 187 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 UPK2O00526 184 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 RFX2P48378 723 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 SGPP2Q8IWX5 399 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 CADM3Q8N126 398 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 OR5H2Q8NGV7 314 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 ZNF2Q9BSG1 426 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 HRASLSQ9HDD0 168 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 C19orf73Q9NVV2 129 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 COMMD9Q9P000 198 aa13.63□□□□□ -0.23
CHMP2A-203ENST00000597209 GGCTO75223 188 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 APOA1P02647 267 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 PMP2P02689 132 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 EIF4EP06730 217 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 IGHV4-30-4P0DP06 118 aa13.62□□□□□ -0.23
CHMP2A-203ENST00000597209 AREGP15514 252 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms