RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TEX13DA0A0J9YY54 714 aaPredicted RBP8.29□□□□□ -1.08
LIG1-210ENST00000596332 A0A1B0GUS0 222 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 G3V318 75 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 UPK2O00526 184 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 ATP6V0E1O15342 81 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 OR5AC1P0C628 307 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 OR9G9P0C7N8 305 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 RPA2P15927 270 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 NQO2P16083 231 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 FAUP35544 74 aaKnown RBP8.29□□□□□ -1.08
LIG1-210ENST00000596332 IZUMO4Q1ZYL8 232 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 C10orf55Q5SWW7 151 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 Q6ZRM9 215 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 SSX9Q7RTT3 188 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 SLC35E3Q7Z769 313 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 SELENOHQ8IZQ5 122 aaKnown RBP8.29□□□□□ -1.08
LIG1-210ENST00000596332 STPG2Q8N412 459 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 MINDY2Q8NBR6 621 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 OR2T6Q8NHC8 308 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 CD300LFQ8TDQ1 290 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 R3HDM4Q96D70 268 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 TMEM56Q96MV1 263 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 NAA60Q9H7X0 242 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 BET1LQ9NYM9 111 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 TMEM56-RWDD3S4R434 201 aa8.29□□□□□ -1.08
LIG1-210ENST00000596332 VWFP04275 2813 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 A0A0B4J293 547 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 MARCH11A6NNE9 402 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 TEX22C9J3V5 150 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 KBTBD11O94819 623 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 OR2A4O95047 310 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 KRASP01116 189 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 IGLV1-40P01703 118 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 TCRBP04435 133 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 G6PCP35575 357 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
LIG1-210ENST00000596332 RBMS2Q15434 407 aaKnown RBP8.28□□□□□ -1.08
LIG1-210ENST00000596332 ANKRD55Q3KP44 614 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 C9orf152Q5JTZ5 239 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 KLHDC1Q8N7A1 406 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 OR2A7Q96R45 310 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 FAM103A1Q9BTL3 118 aaKnown RBP8.28□□□□□ -1.08
LIG1-210ENST00000596332 TMEM140Q9NV12 185 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 COMMD9Q9P000 198 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 COPZ2Q9P299 210 aa8.28□□□□□ -1.08
LIG1-210ENST00000596332 RBMXL2O75526 392 aaKnown RBP8.27□□□□□ -1.09
LIG1-210ENST00000596332 HRASP01112 189 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 CD28P10747 220 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 SPNP16150 400 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 AKR1C4P17516 323 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 VDAC2P45880 294 aaPredicted RBP8.27□□□□□ -1.09
LIG1-210ENST00000596332 CD83Q01151 205 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 PPP1R1AQ13522 171 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 FXYD3Q14802 87 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 VMA21Q3ZAQ7 101 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 TMEM128Q5BJH2 165 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 ZNF329Q86UD4 541 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 RNF152Q8N8N0 203 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 CCDC71LQ8N9Z2 235 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 DUSP18Q8NEJ0 188 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 SGMS2Q8NHU3 365 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 FAM210AQ96ND0 272 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 ALX4Q9H161 411 aaPredicted RBP8.27□□□□□ -1.09
LIG1-210ENST00000596332 KIAA1456Q9P272 454 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 C14orf166Q9Y224 244 aaKnown RBP8.27□□□□□ -1.09
LIG1-210ENST00000596332 NSG2Q9Y328 171 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 WSB1Q9Y6I7 421 aa8.27□□□□□ -1.09
LIG1-210ENST00000596332 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 C9orf170A2RU37 121 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 MSGN1A6NI15 193 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 AP4M1O00189 453 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 SFT2D2O95562 160 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 IGHG4P01861 327 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 FGF2P09038 288 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 ANXA7P20073 488 aaKnown RBP8.26□□□□□ -1.09
LIG1-210ENST00000596332 OR2B8PP59922 312 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 CBX3Q13185 183 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 KLK9Q2XQG4 91 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 AARDQ4LEZ3 155 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 AKIRIN2Q53H80 203 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 LCNL1Q6ZST4 164 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 NRARPQ7Z6K4 114 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 LRTM2Q8N967 370 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 LFNGQ8NES3 379 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 OR5AU1Q8NGC0 362 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 OR4A5Q8NH83 315 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 MYOZ3Q8TDC0 251 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 SCGB3A2Q96PL1 93 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 KLK15Q9H2R5 256 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 TMEM14BQ9NUH8 114 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 KLK9Q9UKQ9 250 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
LIG1-210ENST00000596332 TRAV41A0A0B4J266 112 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 KCNAB3O43448 404 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 B3GALNT1O75752 331 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 PSMB8P28062 276 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 INPP1P49441 399 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms