RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 S100A10P60903 97 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 SRSF2Q01130 221 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 IL15RAQ13261 267 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 POU2AF1Q16633 256 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 VMA21Q3ZAQ7 101 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 Q5BKY6 102 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 Q6ZRM9 215 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 NOXA1Q86UR1 476 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 FOXRED2Q8IWF2 684 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 OR4D5Q8NGN0 318 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 NANPQ8TBE9 248 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 HYLS1Q96M11 299 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 TSNAXQ99598 290 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 YAE1D1Q9NRH1 226 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 LSM5Q9Y4Y9 91 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 SRRM4A7MD48 611 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 WRBO00258 174 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 CD5LO43866 347 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 PITX3O75364 302 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 MPC2O95563 127 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 MOSP00540 346 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 P0C879 139 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM106CPP0CH98 169 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 PAX6P26367 422 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 EIF2B2P49770 351 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 RAB32Q13637 225 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 HES1Q14469 280 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 OR4A47Q6IF82 309 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 TEX29Q8N6K0 151 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 OR4A5Q8NH83 315 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 VSTM2AQ8TAG5 236 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 CFHR4Q92496 578 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 RBMXL1Q96E39 390 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 AJUBAQ96IF1 538 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 COA4Q9NYJ1 87 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 NUP50Q9UKX7 468 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
SHKBP1-209ENST00000595803 BOLA2-SMG1P6H3BVE0 249 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 UPK2O00526 184 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 MED6O75586 246 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 VENTXO95231 258 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 IGKV1D-33P01593 117 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 IGKV1-33P01594 117 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 MBPP02686 304 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 SNRNP70P08621 437 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 OR9G9P0C7N8 305 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 PET100P0DJ07 73 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 SLC25A4P12235 298 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 UBE2KP61086 200 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 ID3Q02535 119 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 HNF4GQ14541 408 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 CXorf66Q5JRM2 361 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 C11orf87Q6NUJ2 197 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 THNSL2Q86YJ6 484 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 TEX45Q8NA69 505 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 RITA1Q96K30 269 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 MEGF9Q9H1U4 602 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 BET1LQ9NYM9 111 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 CACFD1Q9UGQ2 172 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 NSG2Q9Y328 171 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 POMT1Q9Y6A1 747 aa10.48□□□□□ -0.73
SHKBP1-209ENST00000595803 FXYD6-FXYD2A0A087WZ82 144 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 TRAV14DV4A0A0A6YYC5 116 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 A0A0U1RQK1 487 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 K7EPK0 472 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 L7N2F9 121 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 KBTBD11O94819 623 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 NXPH3O95157 252 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 IL6RP08887 468 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 SAA1P0DJI8 122 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 PVALBP20472 110 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 CD24P25063 80 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 VAMP2P63027 116 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 RELBQ01201 579 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 PSG5Q15238 335 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 PRSS54Q6PEW0 395 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 PUSL1Q8N0Z8 303 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM71E2Q8N5Q1 922 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 RNF126Q9BV68 326 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 FKBP11Q9NYL4 201 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 KIAA1456Q9P272 454 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 RCL1Q9Y2P8 373 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM90A26D6RGX4 464 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 SLC25A17O43808 307 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 IFNA17P01571 189 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 IGLV2-23P01705 113 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 FBP1P09467 338 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 TMEM11P17152 192 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms