RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 A0A0G2JLM5 398 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 SULT1C2O00338 296 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 OR2A4O95047 310 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 IGLV1-51P01701 117 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 CBX5P45973 191 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 RFX2P48378 723 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 SYNJ2BPP57105 145 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 KLF5Q13887 457 aaPredicted RBP13.6□□□□□ -0.23
PNKP-206ENST00000595792 TMEM69Q5SWH9 247 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 IL34Q6ZMJ4 242 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 SSX9Q7RTT3 188 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 LYSMD2Q8IV50 215 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 Q8N1Y9 231 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 OR2A7Q96R45 310 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
PNKP-206ENST00000595792 DYNC2H1Q8NCM8 4307 aaKnown RBP13.59□□□□□ -0.23
PNKP-206ENST00000595792 PMP2P02689 132 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 IGHV4-30-4P0DP06 118 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 ZP3P21754 424 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 GNRHRP30968 328 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 RHOGP84095 191 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 TMEM17Q86X19 198 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 TTC9CQ8N5M4 171 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 IFT46Q9NQC8 304 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 EHFQ9NZC4 300 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 COMMD3Q9UBI1 195 aa13.59□□□□□ -0.23
PNKP-206ENST00000595792 PEF1Q9UBV8 284 aaKnown RBP13.59□□□□□ -0.23
PNKP-206ENST00000595792 RYR2Q92736 4967 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 TRAV3A0A0B4J244 114 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 C3orf84H3BNL1 204 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 MPPED1O15442 326 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 CTF1Q16619 201 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 DHRS11Q6UWP2 260 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 SPAG16Q8N0X2 631 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 ZBTB34Q8NCN2 500 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 OR9G4Q8NGQ1 327 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 MUC7Q8TAX7 377 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 GPX8Q8TED1 209 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 KCTD12Q96CX2 325 aaKnown RBP13.58□□□□□ -0.24
PNKP-206ENST00000595792 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 SPIN2AQ99865 258 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 SPIN2BQ9BPZ2 258 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 FXYD6Q9H0Q3 95 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 DMRT1Q9Y5R6 373 aa13.58□□□□□ -0.24
PNKP-206ENST00000595792 ACTL6BO94805 426 aa13.57□□□□□ -0.24
PNKP-206ENST00000595792 AREGP15514 252 aa13.57□□□□□ -0.24
PNKP-206ENST00000595792 ELK1P19419 428 aa13.57□□□□□ -0.24
PNKP-206ENST00000595792 RPL27AP46776 148 aaKnown RBP13.57□□□□□ -0.24
PNKP-206ENST00000595792 OR4A47Q6IF82 309 aa13.57□□□□□ -0.24
PNKP-206ENST00000595792 OR51H1Q8NH63 302 aa13.57□□□□□ -0.24
PNKP-206ENST00000595792 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
PNKP-206ENST00000595792 SACSQ9NZJ4 4579 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 BMPR1BO00238 502 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 RBFOX2O43251 390 aaKnown RBP eCLIP13.56□□□□□ -0.24
PNKP-206ENST00000595792 CREBL2O60519 120 aaPredicted RBP13.56□□□□□ -0.24
PNKP-206ENST00000595792 HPGDSO60760 199 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 OR2J3O76001 311 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 APOA1P02647 267 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 PRSS3P35030 304 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 KIR2DS2P43631 304 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 POU2AF1Q16633 256 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 FANCD2OSQ96PS1 177 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
PNKP-206ENST00000595792 ZNF2Q9BSG1 426 aaPredicted RBP13.56□□□□□ -0.24
PNKP-206ENST00000595792 GAR1Q9NY12 217 aaKnown RBP13.56□□□□□ -0.24
PNKP-206ENST00000595792 BET1LQ9NYM9 111 aa13.56□□□□□ -0.24
PNKP-206ENST00000595792 IZUMO1RA6ND01 250 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 S1PR2O95136 353 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 GABARAPO95166 117 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 HRASP01112 189 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 HERV-K104P61576 105 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 RPL8P62917 257 aaKnown RBP13.55□□□□□ -0.24
PNKP-206ENST00000595792 EXOSC2Q13868 293 aaKnown RBP13.55□□□□□ -0.24
PNKP-206ENST00000595792 CASC10Q5T4H9 136 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 ZMAT4Q9H898 229 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 SLC2A9Q9NRM0 540 aa13.55□□□□□ -0.24
PNKP-206ENST00000595792 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 NPIPB5A8MRT5 1133 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 UPK2O00526 184 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 PGLYRP1O75594 196 aaPredicted RBP13.54□□□□□ -0.24
PNKP-206ENST00000595792 NDUFB8O95169 186 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 REG1AP05451 166 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 CRYGCP07315 174 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 CSN3P07498 182 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 RPA2P15927 270 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 HLA-DMAP28067 261 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 HRH1P35367 487 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 MAS1LP35410 378 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 CATR1Q13166 79 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 ADAMTSL5Q6ZMM2 481 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 SNX29P2Q8IUI4 249 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 OR5H2Q8NGV7 314 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 CMTM3Q96MX0 182 aa13.54□□□□□ -0.24
PNKP-206ENST00000595792 C19orf73Q9NVV2 129 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms