RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 PPP1R27Q86WC6 154 aa16.77■□□□□ 0.28
SCN1B-203ENST00000595652 LGI3Q8N145 548 aa16.77■□□□□ 0.28
SCN1B-203ENST00000595652 VSTM2AQ8TAG5 236 aa16.77■□□□□ 0.28
SCN1B-203ENST00000595652 ZFAND2BQ8WV99 257 aa16.77■□□□□ 0.28
SCN1B-203ENST00000595652 RBPMSQ93062 196 aaKnown RBP16.77■□□□□ 0.28
SCN1B-203ENST00000595652 TMEM56Q96MV1 263 aa16.77■□□□□ 0.28
SCN1B-203ENST00000595652 ZNF430Q9H8G1 570 aaPredicted RBP16.77■□□□□ 0.28
SCN1B-203ENST00000595652 TMEM56-RWDD3S4R434 201 aa16.77■□□□□ 0.28
SCN1B-203ENST00000595652 LINC01548A6NM66 108 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 IGKV1-5P01602 117 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 HLA-DRB1P01911 266 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 PRSS8Q16651 343 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 IZUMO4Q1ZYL8 232 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 KRTAP24-1Q3LI83 254 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 H2BFWTQ7Z2G1 175 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 ABHD5Q8WTS1 349 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 ALX4Q9H161 411 aaPredicted RBP16.76■□□□□ 0.27
SCN1B-203ENST00000595652 BET1LQ9NYM9 111 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 NSG2Q9Y328 171 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 NF1P21359 2839 aa16.76■□□□□ 0.27
SCN1B-203ENST00000595652 IGHV7-81A0A0B4J1V7 117 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 UPK2O00526 184 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 ATG12O94817 140 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 OR9G9P0C7N8 305 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 MECP2P51608 486 aaKnown RBP16.75■□□□□ 0.27
SCN1B-203ENST00000595652 SRPXP78539 464 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 TNXAQ16473 311 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 MRGPRG-AS1Q2M3A8 158 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 SLC35E3Q7Z769 313 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 TMEM167AQ8TBQ9 72 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 MARVELD1Q9BSK0 173 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 TNCP24821 2201 aa16.75■□□□□ 0.27
SCN1B-203ENST00000595652 A0A0G2JRQ6 117 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 TSPAN9O75954 239 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 NDUFA7O95182 113 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 CNIH1O95406 144 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 HKR1P10072 659 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 MYOD1P15172 320 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 CX3CL1P78423 397 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 LYZL2Q7Z4W2 148 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 MMD2Q8IY49 270 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 SLC35G3Q8N808 338 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 IL22RA2Q969J5 263 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 RRNAD1Q96FB5 475 aaKnown RBP16.74■□□□□ 0.27
SCN1B-203ENST00000595652 PARP11Q9NR21 331 aa16.74■□□□□ 0.27
SCN1B-203ENST00000595652 DHFRP00374 187 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 IL5P05113 134 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 VDAC2P45880 294 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-203ENST00000595652 OR2B8PP59922 312 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 NDPQ00604 133 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 FXYD3Q14802 87 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 OR4A5Q8NH83 315 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 OR2T6Q8NHC8 308 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 COQ8AQ8NI60 647 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 GRPEL2Q8TAA5 225 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 ZNF431Q8TF32 576 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-203ENST00000595652 OR51J1Q9H342 316 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 LINC00527Q9UJ94 153 aa16.73■□□□□ 0.27
SCN1B-203ENST00000595652 TET2Q6N021 2002 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-203ENST00000595652 CREBL2O60519 120 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-203ENST00000595652 SNAPC5O75971 98 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 ACTL6BO94805 426 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 DUS4LO95620 317 aaKnown RBP16.72■□□□□ 0.27
SCN1B-203ENST00000595652 IGHG2P01859 326 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 OPN1MWP04001 364 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 IL6RP08887 468 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-203ENST00000595652 HOXB5P09067 269 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 OPN1MW2P0DN77 364 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 OPN1MW3P0DN78 364 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 RPL8P62917 257 aaKnown RBP16.72■□□□□ 0.27
SCN1B-203ENST00000595652 SSBP2P81877 361 aaPredicted RBP16.72■□□□□ 0.27
SCN1B-203ENST00000595652 C10orf55Q5SWW7 151 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 Q8N2B8 174 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 UXS1Q8NBZ7 420 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 OR4F5Q8NH21 305 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 GPR146Q96CH1 333 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 FAM103A1Q9BTL3 118 aaKnown RBP16.72■□□□□ 0.27
SCN1B-203ENST00000595652 MMP24Q9Y5R2 645 aa16.72■□□□□ 0.27
SCN1B-203ENST00000595652 A0A0B4J2A0 478 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 ATP6V0E1O15342 81 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 KCNAB3O43448 404 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 RBMXL2O75526 392 aaKnown RBP16.71■□□□□ 0.27
SCN1B-203ENST00000595652 P0C879 139 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 HLA-GP17693 338 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 MDKP21741 143 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-203ENST00000595652 ZNF562Q6V9R5 426 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 LRTM2Q8N967 370 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 OR4A16Q8NH70 328 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 ARPC1AQ92747 370 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 NOL4LQ96MY1 436 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-203ENST00000595652 PHB2Q99623 299 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 C16orf95Q9H693 158 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 GPN1Q9HCN4 374 aaPredicted RBP16.71■□□□□ 0.27
SCN1B-203ENST00000595652 SHPKQ9UHJ6 478 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 FBXO7Q9Y3I1 522 aa16.71■□□□□ 0.27
SCN1B-203ENST00000595652 PRAF2O60831 178 aa16.7■□□□□ 0.26
SCN1B-203ENST00000595652 C12orf45Q8N5I9 185 aaPredicted RBP16.7■□□□□ 0.26
SCN1B-203ENST00000595652 LINC01006Q8NI28 216 aa16.7■□□□□ 0.26
SCN1B-203ENST00000595652 MITD1Q8WV92 249 aa16.7■□□□□ 0.26
SCN1B-203ENST00000595652 C19orf24Q9BVV8 132 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms