RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 IDO2Q6ZQW0 420 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 LINC00299Q6ZSB3 139 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 TBC1D26Q86UD7 250 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 TOMM5Q8N4H5 51 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 GDPD1Q8N9F7 314 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 TRIM63Q969Q1 353 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 ZNF430Q9H8G1 570 aaPredicted RBP20.17■□□□□ 0.82
TRIM28-204ENST00000594806 BATF3Q9NR55 127 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 MPPED1O15442 326 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 TSPAN15O95858 294 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 FGF2P09038 288 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 TNXAQ16473 311 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 HIST2H2BDQ6DRA6 164 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 VKORC1L1Q8N0U8 176 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 CCDC71LQ8N9Z2 235 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 LFNGQ8NES3 379 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 GRPEL2Q8TAA5 225 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 R3HDM4Q96D70 268 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 FAM103A1Q9BTL3 118 aaKnown RBP20.16■□□□□ 0.82
TRIM28-204ENST00000594806 SRRQ9GZT4 340 aa20.16■□□□□ 0.82
TRIM28-204ENST00000594806 CTSDP07339 412 aaPredicted RBP20.15■□□□□ 0.82
TRIM28-204ENST00000594806 CDX1P47902 265 aaPredicted RBP20.15■□□□□ 0.82
TRIM28-204ENST00000594806 PPP5CP53041 499 aa20.15■□□□□ 0.82
TRIM28-204ENST00000594806 PIGPP57054 158 aa20.15■□□□□ 0.82
TRIM28-204ENST00000594806 ERVK-16P61578 105 aa20.15■□□□□ 0.82
TRIM28-204ENST00000594806 FAAP20Q6NZ36 180 aa20.15■□□□□ 0.82
TRIM28-204ENST00000594806 SCGB3A2Q96PL1 93 aa20.15■□□□□ 0.82
TRIM28-204ENST00000594806 TRRAPQ9Y4A5 3859 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 A0A1W2PN81 502 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 A0A1W2PRX2 142 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 B3GALNT1O75752 331 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 S1PR2O95136 353 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 RPLP1P05386 114 aaKnown RBP20.14■□□□□ 0.81
TRIM28-204ENST00000594806 CHRNA7P36544 502 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 LPAR6P43657 344 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 ZNF45Q02386 682 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 KLF9Q13886 244 aaPredicted RBP20.14■□□□□ 0.81
TRIM28-204ENST00000594806 ZNF585BQ52M93 769 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 OR4A47Q6IF82 309 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 DMBX1Q8NFW5 382 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 OR51S1Q8NGJ8 323 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 OR13C8Q8NGS7 320 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 MARCH1Q8TCQ1 289 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 MYOZ3Q8TDC0 251 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 SRSF12Q8WXF0 261 aaKnown RBP20.14■□□□□ 0.81
TRIM28-204ENST00000594806 SPIN2AQ99865 258 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 SPIN2BQ9BPZ2 258 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 COPZ2Q9P299 210 aa20.14■□□□□ 0.81
TRIM28-204ENST00000594806 C14orf166Q9Y224 244 aaKnown RBP20.14■□□□□ 0.81
TRIM28-204ENST00000594806 H3BUA1 57 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 IL6RP08887 468 aaPredicted RBP20.13■□□□□ 0.81
TRIM28-204ENST00000594806 PF4V1P10720 104 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 RPA2P15927 270 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 RPL8P62917 257 aaKnown RBP20.13■□□□□ 0.81
TRIM28-204ENST00000594806 SSX9Q7RTT3 188 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 ZNF695Q8IW36 515 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 FAM110DQ8TAY7 271 aaPredicted RBP20.13■□□□□ 0.81
TRIM28-204ENST00000594806 HRASLSQ9HDD0 168 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 MCUBQ9NWR8 336 aa20.13■□□□□ 0.81
TRIM28-204ENST00000594806 RAB9AP51151 201 aa20.12■□□□□ 0.81
TRIM28-204ENST00000594806 MRGPRFQ96AM1 343 aa20.12■□□□□ 0.81
TRIM28-204ENST00000594806 UBE2E2Q96LR5 201 aa20.12■□□□□ 0.81
TRIM28-204ENST00000594806 PHB2Q99623 299 aa20.12■□□□□ 0.81
TRIM28-204ENST00000594806 SLA2Q9H6Q3 261 aa20.12■□□□□ 0.81
TRIM28-204ENST00000594806 MSGN1A6NI15 193 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 MARCH11A6NNE9 402 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 NUDT19A8MXV4 375 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 H0Y980 276 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 BRI3O95415 125 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 PI3P19957 117 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 TMEM140Q9NV12 185 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 GPR132Q9UNW8 380 aa20.11■□□□□ 0.81
TRIM28-204ENST00000594806 UPK2O00526 184 aa20.1■□□□□ 0.81
TRIM28-204ENST00000594806 SOX15O60248 233 aa20.1■□□□□ 0.81
TRIM28-204ENST00000594806 SERPINE2P07093 398 aa20.1■□□□□ 0.81
TRIM28-204ENST00000594806 CNPY1Q3B7I2 92 aa20.1■□□□□ 0.81
TRIM28-204ENST00000594806 KLHL30-AS1Q8NEE0 82 aa20.1■□□□□ 0.81
TRIM28-204ENST00000594806 KLK15Q9H2R5 256 aa20.1■□□□□ 0.81
TRIM28-204ENST00000594806 MGAM2Q2M2H8 2515 aa20.09■□□□□ 0.81
TRIM28-204ENST00000594806 HLA-GP17693 338 aa20.09■□□□□ 0.81
TRIM28-204ENST00000594806 RPL27AP46776 148 aaKnown RBP20.09■□□□□ 0.81
TRIM28-204ENST00000594806 INPP1P49441 399 aa20.09■□□□□ 0.81
TRIM28-204ENST00000594806 TRIQKQ629K1 86 aa20.09■□□□□ 0.81
TRIM28-204ENST00000594806 ZNF491Q8N8L2 437 aa20.09■□□□□ 0.81
TRIM28-204ENST00000594806 VSIG4Q9Y279 399 aa20.09■□□□□ 0.81
TRIM28-204ENST00000594806 C3orf85A0A1B0GTC6 90 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 ATG12O94817 140 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 KRASP01116 189 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 PF4P02776 101 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 KIAA0141Q14154 515 aaPredicted RBP20.08■□□□□ 0.81
TRIM28-204ENST00000594806 ASPHD1Q5U4P2 390 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 LCNL1Q6ZST4 164 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 SLC25A42Q86VD7 318 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 C4orf3Q8WVX3 66 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 TSC22D3Q99576 134 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 RTBDNQ9BSG5 229 aaPredicted RBP20.08■□□□□ 0.81
TRIM28-204ENST00000594806 C5orf66Q9H5L9 145 aa20.08■□□□□ 0.81
TRIM28-204ENST00000594806 ZNF57Q68EA5 555 aaPredicted RBP20.07■□□□□ 0.8
TRIM28-204ENST00000594806 OR5T1Q8NG75 326 aa20.07■□□□□ 0.8
TRIM28-204ENST00000594806 COMMD5Q9GZQ3 224 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms