RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 RAB18Q9NP72 206 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 ESM1Q9NQ30 184 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 TMEM140Q9NV12 185 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 BET1LQ9NYM9 111 aa8.65□□□□□ -1.02
USE1-204ENST00000594399 METTL1Q9UBP6 276 aaKnown RBP8.65□□□□□ -1.02
USE1-204ENST00000594399 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 FGF16O43320 207 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 TCF21O43680 179 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 SSNA1O43805 119 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 KBTBD11O94819 623 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 P0C879 139 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 LYZL2Q7Z4W2 148 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 CADM3Q8N126 398 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 FAM71E2Q8N5Q1 922 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 Q8N9W7 124 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 TEX45Q8NA69 505 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 UXS1Q8NBZ7 420 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 OR4A5Q8NH83 315 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
USE1-204ENST00000594399 DUX5Q96PT3 197 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 RASL11BQ9BPW5 248 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 TPSG1Q9NRR2 321 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 PLSCR3Q9NRY6 295 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 TMED3Q9Y3Q3 217 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 MMP24Q9Y5R2 645 aa8.64□□□□□ -1.03
USE1-204ENST00000594399 DBX1A6NMT0 343 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 ADAP1O75689 374 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 IFNA21P01568 189 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 CRYGBP07316 175 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 HOXB5P09067 269 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 GGNBP1Q5YKI7 109 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 THOC7Q6I9Y2 204 aaKnown RBP8.63□□□□□ -1.03
USE1-204ENST00000594399 Q6ZNX1 250 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 PPP1R27Q86WC6 154 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 SPIN2AQ99865 258 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 SPIN2BQ9BPZ2 258 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
USE1-204ENST00000594399 C15orf61A6NNL5 157 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 UPK2O00526 184 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 CCSO14618 274 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 GOSR2O14653 212 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 GPR137BO60478 399 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 SNAPC5O75971 98 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 CA2P00918 260 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 HLA-DRB1P01911 266 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
USE1-204ENST00000594399 IL6RP08887 468 aaPredicted RBP8.62□□□□□ -1.03
USE1-204ENST00000594399 FGF2P09038 288 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 OR9G9P0C7N8 305 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 OR2B8PP59922 312 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 RPL8P62917 257 aaKnown RBP8.62□□□□□ -1.03
USE1-204ENST00000594399 UBA52P62987 128 aaKnown RBP8.62□□□□□ -1.03
USE1-204ENST00000594399 IZUMO4Q1ZYL8 232 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 FOXRED2Q8IWF2 684 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 MMD2Q8IY49 270 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 OR5M8Q8NGP6 311 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 OR4A16Q8NH70 328 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 GPR146Q96CH1 333 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 NPFFR1Q9GZQ6 430 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 MED28Q9H204 178 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 RANBP3Q9H6Z4 567 aaPredicted RBP8.62□□□□□ -1.03
USE1-204ENST00000594399 CACNG5Q9UF02 275 aa8.62□□□□□ -1.03
USE1-204ENST00000594399 TRAV3A0A0B4J244 114 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 A0A1B0GU03 582 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 FAM25EA8MYX2 175 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 RBMXL2O75526 392 aaKnown RBP8.61□□□□□ -1.03
USE1-204ENST00000594399 ACTL6BO94805 426 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 SULT1A3P0DMM9 295 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 SULT1A4P0DMN0 295 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 SLC25A6P12236 298 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 HLA-GP17693 338 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 MAS1LP35410 378 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 RPL15P61313 204 aaKnown RBP8.61□□□□□ -1.03
USE1-204ENST00000594399 RRAS2P62070 204 aaPredicted RBP8.61□□□□□ -1.03
USE1-204ENST00000594399 GNB1P62873 340 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 RELBQ01201 579 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 SMCO1Q147U7 214 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 TNXAQ16473 311 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 PRSS8Q16651 343 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 TMEM158Q8WZ71 300 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 CLCC1Q96S66 551 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 MDFIQ99750 246 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 ZNF430Q9H8G1 570 aaPredicted RBP8.61□□□□□ -1.03
USE1-204ENST00000594399 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 FKBP11Q9NYL4 201 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 MGAT4CQ9UBM8 478 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 PRNDQ9UKY0 176 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 FOXA2Q9Y261 457 aaPredicted RBP8.61□□□□□ -1.03
USE1-204ENST00000594399 NSG2Q9Y328 171 aa8.61□□□□□ -1.03
USE1-204ENST00000594399 FBN1P35555 2871 aaKnown RBP8.61□□□□□ -1.03
USE1-204ENST00000594399 CUBNO60494 3623 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 SH2D7A6NKC9 451 aaPredicted RBP8.6□□□□□ -1.03
USE1-204ENST00000594399 MPTX1A8MV57 137 aa8.6□□□□□ -1.03
USE1-204ENST00000594399 TRIM77I1YAP6 450 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms