RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MFSD4AQ8N468 514 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 ZBTB34Q8NCN2 500 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 BEST4Q8NFU0 473 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 OR4A5Q8NH83 315 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 EDA2RQ9HAV5 297 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 ADAM30Q9UKF2 790 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
APOC1-209ENST00000592885 DPPA5A6NC42 116 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 LGALS9O00182 355 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 RBFOX2O43251 390 aaKnown RBP eCLIP10.07□□□□□ -0.8
APOC1-209ENST00000592885 GGCTO75223 188 aaKnown RBP10.07□□□□□ -0.8
APOC1-209ENST00000592885 PRH1P02810 166 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 CRYGCP07315 174 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 FGF2P09038 288 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 HIST1H1BP16401 226 aaKnown RBP10.07□□□□□ -0.8
APOC1-209ENST00000592885 SDC2P34741 201 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 HOGA1Q86XE5 327 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 DYNLRB2Q8TF09 96 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 SLC25A38Q96DW6 304 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 FYTTD1Q96QD9 318 aaKnown RBP10.07□□□□□ -0.8
APOC1-209ENST00000592885 TUBA4BQ9H853 241 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 SLC2A9Q9NRM0 540 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 TAS2R8Q9NYW2 309 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 SPATA2Q9UM82 520 aa10.07□□□□□ -0.8
APOC1-209ENST00000592885 OR2J3O76001 311 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 IFNA6P05013 189 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 CBX5P45973 191 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 RPL8P62917 257 aaKnown RBP10.06□□□□□ -0.8
APOC1-209ENST00000592885 CATR1Q13166 79 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 HAGHQ16775 308 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 VKORC1L1Q8N0U8 176 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 OR13F1Q8NGS4 319 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 BORCS5Q969J3 196 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 ZC4H2Q9NQZ6 224 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 TECRQ9NZ01 308 aaKnown RBP10.06□□□□□ -0.8
APOC1-209ENST00000592885 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 BOLA1Q9Y3E2 137 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 DMRT1Q9Y5R6 373 aa10.06□□□□□ -0.8
APOC1-209ENST00000592885 TRAV18A0A075B6X5 111 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 IZUMO1RA6ND01 250 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 HMX3A6NHT5 357 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 TPPPO94811 219 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 PPYP01298 95 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 IL6RP08887 468 aaPredicted RBP10.05□□□□□ -0.8
APOC1-209ENST00000592885 HLA-GP17693 338 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 PSMB6P28072 239 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 FCGR2CP31995 323 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 BRWD1-AS2P59051 145 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 TAS2R31P59538 309 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 CD81P60033 236 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 MXD1Q05195 221 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 POU2AF1Q16633 256 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 TIMM50Q3ZCQ8 353 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
APOC1-209ENST00000592885 GPHB5Q86YW7 130 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 SRSF8Q9BRL6 282 aaKnown RBP10.05□□□□□ -0.8
APOC1-209ENST00000592885 DIABLOQ9NR28 239 aa10.05□□□□□ -0.8
APOC1-209ENST00000592885 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 C2orf70A6NJV1 201 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 A8MWP6 167 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CTRB1P17538 263 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 KCTD21Q4G0X4 260 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 IDNKQ5T6J7 187 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CTRB2Q6GPI1 263 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 THOC7Q6I9Y2 204 aaKnown RBP10.04□□□□□ -0.8
APOC1-209ENST00000592885 ADAMTSL5Q6ZMM2 481 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 LINC00322Q6ZN03 302 aaPredicted RBP10.04□□□□□ -0.8
APOC1-209ENST00000592885 CROCCP3Q8IVE0 287 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 SPAG16Q8N0X2 631 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 OR5H6Q8NGV6 325 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 SECTM1Q8WVN6 248 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 EEF1AKMT3Q96AZ1 226 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CXorf58Q96LI9 332 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CCDC140Q96MF4 163 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 NEURL2Q9BR09 285 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 AUNIPQ9H7T9 357 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CCL28Q9NRJ3 127 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 CEPT1Q9Y6K0 416 aa10.04□□□□□ -0.8
APOC1-209ENST00000592885 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 LCE6AA0A183 80 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 A0A1B0GW64 132 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 E7EUB6 86 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 HPRT1P00492 218 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 CLEC2LP0C7M8 214 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 FOLR2P14207 255 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 NQO2P16083 231 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 ARL3P36405 182 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 DEFB114Q30KQ6 69 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 SSX9Q7RTT3 188 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 OR5AP2Q8NGF4 316 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 GIMAP1Q8WWP7 306 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 SLC5A7Q9GZV3 580 aa10.03□□□□□ -0.8
APOC1-209ENST00000592885 COMMD9Q9P000 198 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms