RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CAPZBP47756 277 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 ARL4DP49703 201 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 CAMPP49913 170 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 CLDN15P56746 228 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 NHLH1Q02575 133 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 PQLC2Q6ZP29 291 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 OR10G3Q8NGC4 313 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 FGFBP3Q8TAT2 258 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 CDC42EP3Q9UKI2 254 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 FAM181BA6NEQ2 426 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 TMPRSS2O15393 492 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 APOA2P02652 100 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 CA6P23280 308 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 CD27P26842 260 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 TNFRSF14Q92956 283 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 TMEM147Q9BVK8 224 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 THYN1Q9P016 225 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 SH3BGRL2Q9UJC5 107 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 FAM231BA6NCW3 169 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 HOXC12P31275 282 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 C17orf67Q0P5P2 114 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 SAMD13Q5VXD3 122 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 SLC23A3Q6PIS1 610 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 OR5A2Q8NGI9 324 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 METTL7AQ9H8H3 244 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 GCM1Q9NP62 436 aa12.71□□□□□ -0.38
CIRBP-228ENST00000590347 SYNGR1O43759 233 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
CIRBP-228ENST00000590347 CLDN18P56856 261 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
CIRBP-228ENST00000590347 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 FAM168AQ92567 244 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 ULBP2Q9BZM5 246 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 OR2W1Q9Y3N9 320 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
CIRBP-228ENST00000590347 TMEM116Q8NCL8 245 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 EML6Q6ZMW3 1958 aa12.7□□□□□ -0.38
CIRBP-228ENST00000590347 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 LGALS7P47929 136 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 TMEM14EPQ6UXP3 125 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 ASCL4Q6XD76 172 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 V9GYV3 84 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 A0A1W2PR77 199 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 ZNF32P17041 273 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 UBE2G1P62253 170 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 HIST3H3Q16695 136 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 TRIM61Q5EBN2 209 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 NABP1Q96AH0 204 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 PILRBQ9UKJ0 227 aa12.69□□□□□ -0.38
CIRBP-228ENST00000590347 DHHO43323 396 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
CIRBP-228ENST00000590347 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 KCNIP2Q9NS61 270 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 FER1L5A0AVI2 2057 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 C7orf71A4D174 169 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 TLX3O43711 291 aaPredicted RBP12.68□□□□□ -0.38
CIRBP-228ENST00000590347 APCSP02743 223 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 CRYBB3P26998 211 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 SSX8Q7RTT4 187 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 MAP1BP46821 2468 aaKnown RBP12.68□□□□□ -0.38
CIRBP-228ENST00000590347 ABCA1O95477 2261 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 DEGS1O15121 323 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 IGLV2-14P01704 120 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 CD1BP29016 333 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 BMI1P35226 326 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 CFHR1Q03591 330 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 DCAF12Q5T6F0 453 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 OR4A5Q8NH83 315 aa12.68□□□□□ -0.38
CIRBP-228ENST00000590347 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
CIRBP-228ENST00000590347 AHCTF1Q8WYP5 2266 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 H3BUT2 72 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 CTSSP25774 331 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 ZNF138P52744 262 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 PAX2Q02962 417 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.67□□□□□ -0.38
CIRBP-228ENST00000590347 DEFB125Q8N687 156 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 OR8B3Q8NGG8 313 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 FGF23Q9GZV9 251 aaPredicted RBP12.67□□□□□ -0.38
CIRBP-228ENST00000590347 COLQQ9Y215 455 aaPredicted RBP12.67□□□□□ -0.38
CIRBP-228ENST00000590347 DSPP15924 2871 aaKnown RBP12.67□□□□□ -0.38
CIRBP-228ENST00000590347 DYSFO75923 2080 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 THADAQ6YHU6 1953 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 IGLV3-19P01714 112 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 JMJD8Q96S16 334 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 FAM234AQ9H0X4 552 aa12.67□□□□□ -0.38
CIRBP-228ENST00000590347 IGKV3D-11A0A0A0MRZ8 115 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 H0YJW9 148 aa12.66□□□□□ -0.38
CIRBP-228ENST00000590347 HAND1O96004 215 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms