RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 IGKV1-5P01602 117 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 HLA-AP01891 365 aaKnown RBP9.54□□□□□ -0.88
APOC1-206ENST00000590334 IL5P05113 134 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 SPNP16150 400 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 VAMP1P23763 118 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 ERVK-16P61578 105 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 SSBP2P81877 361 aaPredicted RBP9.54□□□□□ -0.88
APOC1-206ENST00000590334 PJVKQ0ZLH3 352 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 PLGLAQ15195 96 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 PRSS8Q16651 343 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 RGS21Q2M5E4 152 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 ANKRD55Q3KP44 614 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 ZNF562Q6V9R5 426 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 MMD2Q8IY49 270 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 LGI3Q8N145 548 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 HSPB9Q9BQS6 159 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 ZNF580Q9UK33 172 aa9.54□□□□□ -0.88
APOC1-206ENST00000590334 A0A0B4J2A0 478 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 DUXBA0A1W2PPF3 345 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
APOC1-206ENST00000590334 UPK2O00526 184 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 KCNAB3O43448 404 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 PRAF2O60831 178 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 CA2P00918 260 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 MAS1LP35410 378 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 CRIP2P52943 208 aaPredicted RBP9.53□□□□□ -0.88
APOC1-206ENST00000590334 KRTAP24-1Q3LI83 254 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 C4orf46Q504U0 113 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 TMEM268Q5VZI3 342 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 SSX9Q7RTT3 188 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 ZNF695Q8IW36 515 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 FAM219AQ8IW50 185 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.53□□□□□ -0.88
APOC1-206ENST00000590334 OR4F5Q8NH21 305 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 MITD1Q8WV92 249 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
APOC1-206ENST00000590334 ZNF430Q9H8G1 570 aaPredicted RBP9.53□□□□□ -0.88
APOC1-206ENST00000590334 SERTAD4Q9NUC0 356 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 SHPKQ9UHJ6 478 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 MMP24Q9Y5R2 645 aa9.53□□□□□ -0.88
APOC1-206ENST00000590334 TMEM89A2RUT3 159 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 LINC01548A6NM66 108 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 INMT-MINDY4F8WBC2 141 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 IGF1P05019 195 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 OR9G9P0C7N8 305 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 VDAC1P21796 283 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 CX3CL1P78423 397 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 H2BFWTQ7Z2G1 175 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 SLC35E3Q7Z769 313 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 OR52B4Q8NGK2 314 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 OR2T6Q8NHC8 308 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 LINC01006Q8NI28 216 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 ZNF431Q8TF32 576 aaPredicted RBP9.52□□□□□ -0.89
APOC1-206ENST00000590334 CASTOR1Q8WTX7 329 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.89
APOC1-206ENST00000590334 CLCC1Q96S66 551 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 OR51J1Q9H342 316 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 BEX1Q9HBH7 125 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
APOC1-206ENST00000590334 TENM1Q9UKZ4 2725 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 TRAV3A0A0B4J244 114 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 A0A0G2JRQ6 117 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 A0A1B0GUS0 222 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 DBX1A6NMT0 343 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 SNRPGP15A8MWD9 76 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 AP4M1O00189 453 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 DHFRP00374 187 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
APOC1-206ENST00000590334 HLA-GP17693 338 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 COMPP49747 757 aaPredicted RBP9.51□□□□□ -0.89
APOC1-206ENST00000590334 AKR1C2P52895 323 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 RAB25P57735 213 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
APOC1-206ENST00000590334 NDPQ00604 133 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 OXA1LQ15070 435 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 AARDQ4LEZ3 155 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 C9orf152Q5JTZ5 239 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 FOXRED2Q8IWF2 684 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 COQ8AQ8NI60 647 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 RRNAD1Q96FB5 475 aaKnown RBP9.51□□□□□ -0.89
APOC1-206ENST00000590334 SEC22CQ9BRL7 303 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 TMEM14BQ9NUH8 114 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 FOXA2Q9Y261 457 aaPredicted RBP9.51□□□□□ -0.89
APOC1-206ENST00000590334 JMJD1CQ15652 2540 aa9.51□□□□□ -0.89
APOC1-206ENST00000590334 C2CD3Q4AC94 2353 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 A0A0B4J293 547 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 CLPSL1A2RUU4 121 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 C15orf61A6NNL5 157 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 ATP6V0E1O15342 81 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 SNAPC5O75971 98 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 SLC25A6P12236 298 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 VDAC2P45880 294 aaPredicted RBP9.5□□□□□ -0.89
APOC1-206ENST00000590334 FOXL1Q12952 345 aa9.5□□□□□ -0.89
APOC1-206ENST00000590334 FXYD3Q14802 87 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms