RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 MC5RP33032 325 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 RIPPLY3P57055 190 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 TFF3Q07654 80 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 POLR2AP24928 1970 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-214ENST00000589677 RRHO14718 337 aa12.46□□□□□ -0.42
SMARCA4-214ENST00000589677 MEF2CQ06413 473 aaPredicted RBP12.46□□□□□ -0.42
SMARCA4-214ENST00000589677 SBF2Q86WG5 1849 aa12.46□□□□□ -0.42
SMARCA4-214ENST00000589677 PLAUP00749 431 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 SPINK14Q6IE38 97 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 RBPMS2Q6ZRY4 209 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 WDR31Q8NA23 367 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 ADCYAP1P18509 176 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 FAM131CQ96AQ9 280 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 ATXN7O15265 892 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 RND2P52198 227 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 UBE2V1Q13404 147 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 RND1Q92730 232 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 C1RLQ9NZP8 487 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 MKRN2OSH3BPM6 223 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 CGAP01215 116 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 IGHV2-70P01814 119 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 PSG9Q00887 426 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 RELQ04864 619 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 ACSF3Q4G176 576 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 ZNF664Q8N3J9 261 aa12.45□□□□□ -0.42
SMARCA4-214ENST00000589677 SNAI2O43623 268 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 TMEM54Q969K7 222 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 FNDC4Q9H6D8 234 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 ODAMA1E959 279 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 ID3Q02535 119 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 FOXL1Q12952 345 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 ELOVL5Q9NYP7 299 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 CLEC1BQ9P126 229 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 SFTPA2Q8IWL1 248 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 OR2K2Q8NGT1 345 aa12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 RPP25Q9BUL9 199 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-214ENST00000589677 A8MWP6 167 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 TIMM23BQ5SRD1 257 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 TMEM78Q5T7P6 136 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 PCSK4Q6UW60 755 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 PRELID3AQ96N28 172 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 RPP21Q9H633 154 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 IGHV3-21A0A0B4J1V1 117 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 PPIAL4DF5H284 164 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 ATP5LO75964 103 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 PTGDSP41222 190 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 MAGEA5P43359 124 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 FAM89BQ8N5H3 189 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 LDLRAD4O15165 306 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 ANOS1P23352 680 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 COPS9Q8WXC6 57 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 MS4A6AQ9H2W1 248 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 LPAR2Q9HBW0 351 aa12.43□□□□□ -0.42
SMARCA4-214ENST00000589677 PEX7O00628 323 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 TMEM30BQ3MIR4 351 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 C10orf126Q8N4M7 172 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 CHRNA10Q9GZZ6 450 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 WNT5BQ9H1J7 359 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 PLXNB2O15031 1838 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 TRAV30A0A087WSZ9 112 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 TRAV8-6A0A0B4J262 113 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 PGPEP1LA6NFU8 196 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 UCP2P55851 309 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 UMODP07911 640 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 GZMBP10144 247 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 Q6AWC8 147 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 TMEM160Q9NX00 188 aa12.42□□□□□ -0.42
SMARCA4-214ENST00000589677 LYPD3O95274 346 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 DEFB109BQ30KR1 87 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 TCFL5Q9UL49 500 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 TSPAN7P41732 249 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 ZDHHC16Q969W1 377 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 FAM157AC9JC47 383 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 AGFG2O95081 481 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 TSPAN13O95857 204 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 PLPPR1Q8TBJ4 325 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 EAF1Q96JC9 268 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 CALYQ9NYX4 217 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 F5P12259 2224 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 DOCK5Q9H7D0 1870 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 LHFPL1Q86WI0 220 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 PAQR4Q8N4S7 273 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 CHCHD1Q96BP2 118 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms