RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, human

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNN1-208	ENST00000588935	FOXRED2	Q8IWF2	684 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	KLHDC1	Q8N7A1	406 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	TCTEX1D1	Q8N7M0	179 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	CASTOR1	Q8WTX7	329 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	AIFM2	Q9BRQ8	373 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	OR51J1	Q9H342	316 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	TMEM140	Q9NV12	185 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	NSG2	Q9Y328	171 aa		11.52	□□□□□ -0.57
CNN1-208	ENST00000588935	FBN1	P35555	2871 aa	Known RBP	11.52	□□□□□ -0.57
CNN1-208	ENST00000588935		A0A1B0GUS0	222 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935		G3V318	75 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	ACTL6B	O94805	426 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	APELA	P0DMC3	54 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	PROK1	P58294	105 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	SUPT4H1	P63272	117 aa	Known RBP	11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	NDP	Q00604	133 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	ECSCR	Q19T08	205 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	IZUMO4	Q1ZYL8	232 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	MRGPRG-AS1	Q2M3A8	158 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	C10orf55	Q5SWW7	151 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	ZNF695	Q8IW36	515 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	PUSL1	Q8N0Z8	303 aa	Known RBP	11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	C3orf56	Q8N813	242 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	RNASE11	Q8TAA1	199 aa	Known RBP	11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	ENKUR	Q8TC29	256 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	GLYATL2	Q8WU03	294 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	COMMD9	Q9P000	198 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	FBXO7	Q9Y3I1	522 aa		11.51	□□□□□ -0.57
CNN1-208	ENST00000588935	TET2	Q6N021	2002 aa	Predicted RBP	11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	MARCH11	A6NNE9	402 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	AP4M1	O00189	453 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	UPK2	O00526	184 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	KCNAB3	O43448	404 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	KBTBD11	O94819	623 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	OR9G9	P0C7N8	305 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	UCP1	P25874	307 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	SLC6A1	P30531	599 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	AKR1C2	P52895	323 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	DEFA1	P59665	94 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	DEFA3	P59666	94 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	KRTAP10-3	P60369	221 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	DHODH	Q02127	395 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	PPP1R1A	Q13522	171 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	TMEM187	Q14656	261 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	TMEM128	Q5BJH2	165 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	TMEM268	Q5VZI3	342 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	ZNF562	Q6V9R5	426 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	H2BFWT	Q7Z2G1	175 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	SLC25A42	Q86VD7	318 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	MMD2	Q8IY49	270 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	SELENOH	Q8IZQ5	122 aa	Known RBP	11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	STPG2	Q8N412	459 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	LHFPL5	Q8TAF8	219 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	VSTM2A	Q8TAG5	236 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	TMEM167A	Q8TBQ9	72 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	ARPC1A	Q92747	370 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	FYTTD1	Q96QD9	318 aa	Known RBP	11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	PHB2	Q99623	299 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	TMEM222	Q9H0R3	208 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	C20orf85	Q9H1P6	137 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	MMP24	Q9Y5R2	645 aa		11.5	□□□□□ -0.57
CNN1-208	ENST00000588935	PSMB11	A5LHX3	300 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	MSGN1	A6NI15	193 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	SNAPC5	O75971	98 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	IGKV1-5	P01602	117 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	H2AFB2	P0C5Z0	115 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	EGR2	P11161	476 aa	Predicted RBP	11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	ANXA3	P12429	323 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	SSBP2	P81877	361 aa	Predicted RBP	11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	C4orf46	Q504U0	113 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	UNQ5815/PRO19632	Q6UWF5	114 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	NRARP	Q7Z6K4	114 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	LFNG	Q8NES3	379 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	OR5AU1	Q8NGC0	362 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	SEC22A	Q96IW7	307 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	NUDT15	Q9NV35	164 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	BET1L	Q9NYM9	111 aa		11.49	□□□□□ -0.57
CNN1-208	ENST00000588935	TRAV41	A0A0B4J266	112 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	RBMXL2	O75526	392 aa	Known RBP	11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	SFT2D2	O95562	160 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	CDS2	O95674	445 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	VDAC1	P21796	283 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	OR2B8P	P59922	312 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	RPL8	P62917	257 aa	Known RBP	11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	POU2AF1	Q16633	256 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	OR5T1	Q8NG75	326 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	OR52B4	Q8NGK2	314 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	OR4A5	Q8NH83	315 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	RRNAD1	Q96FB5	475 aa	Known RBP	11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	HINT2	Q9BX68	163 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935	WNT10A	Q9GZT5	417 aa		11.48	□□□□□ -0.57
CNN1-208	ENST00000588935		A0A0G2JRQ6	117 aa		11.47	□□□□□ -0.57
CNN1-208	ENST00000588935	C9orf170	A2RU37	121 aa		11.47	□□□□□ -0.57
CNN1-208	ENST00000588935	HMX3	A6NHT5	357 aa		11.47	□□□□□ -0.57
CNN1-208	ENST00000588935	CREBL2	O60519	120 aa	Predicted RBP	11.47	□□□□□ -0.57
CNN1-208	ENST00000588935	B3GALNT1	O75752	331 aa		11.47	□□□□□ -0.57
CNN1-208	ENST00000588935	ATG12	O94817	140 aa		11.47	□□□□□ -0.57
CNN1-208	ENST00000588935	OR4E1	P0C645	316 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms