RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LHFPL1Q86WI0 220 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 VKORC1L1Q8N0U8 176 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 MCFD2Q8NI22 146 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 TINAGL1Q9GZM7 467 aaPredicted RBP12.62□□□□□ -0.39
ERBB2-222ENST00000584908 GNB4Q9HAV0 340 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 FAM212BQ9NTI7 297 aaPredicted RBP12.62□□□□□ -0.39
ERBB2-222ENST00000584908 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 DNAH3Q8TD57 4116 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 RLN1P04808 185 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 F2RP25116 425 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 CD40LGP29965 261 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 TNFSF8P32971 234 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 MAS1LP35410 378 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 TAS2R19P59542 299 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 DEFA6Q01524 100 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 IL18Q14116 193 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 TNXAQ16473 311 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 CADM3Q8N126 398 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 POC5Q8NA72 575 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 OR4A5Q8NH83 315 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 COMMD9Q9P000 198 aa12.62□□□□□ -0.39
ERBB2-222ENST00000584908 CCDC160A6NGH7 325 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 MSGN1A6NI15 193 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-222ENST00000584908 IFNA6P05013 189 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 NQO2P16083 231 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 SLC38A6Q8IZM9 456 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 DGCR14Q96DF8 476 aaKnown RBP12.61□□□□□ -0.39
ERBB2-222ENST00000584908 SPIN2AQ99865 258 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 SPIN2BQ9BPZ2 258 aa12.61□□□□□ -0.39
ERBB2-222ENST00000584908 ACTL6BO94805 426 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 IGLL1P15814 213 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 ZNF585BQ52M93 769 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 OR4A47Q6IF82 309 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 STEAP1BQ6NZ63 245 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 C1QL4Q86Z23 238 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 OR11H1Q8NG94 326 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 ZNF486Q96H40 463 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-222ENST00000584908 DUX3Q96PT4 197 aa12.6□□□□□ -0.39
ERBB2-222ENST00000584908 WIPF1O43516 503 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 S1PR2O95136 353 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 RAB3DO95716 219 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 LGALS1P09382 135 aaKnown RBP12.59□□□□□ -0.39
ERBB2-222ENST00000584908 ZNF735P0CB33 412 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 S100GP29377 79 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 RND3P61587 244 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 RPL8P62917 257 aaKnown RBP12.59□□□□□ -0.39
ERBB2-222ENST00000584908 C10orf55Q5SWW7 151 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 SSX9Q7RTT3 188 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 ADAD2Q8NCV1 583 aaKnown RBP12.59□□□□□ -0.39
ERBB2-222ENST00000584908 OR5T1Q8NG75 326 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 TERB2Q8NHR7 220 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 MS4A10Q96PG2 267 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 PHB2Q99623 299 aa12.59□□□□□ -0.39
ERBB2-222ENST00000584908 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
ERBB2-222ENST00000584908 TGP01266 2768 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 A0A1B0GW64 132 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 TEX22C9J3V5 150 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 TRGV3P03979 118 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.4
ERBB2-222ENST00000584908 TPPP2P59282 170 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 ZNF616Q08AN1 781 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 MEF2DQ14814 521 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 PHLDA2Q53GA4 152 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 TTC9CQ8N5M4 171 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 OR1N2Q8NGR9 330 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 GPR61Q9BZJ8 451 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 SLC2A9Q9NRM0 540 aa12.58□□□□□ -0.4
ERBB2-222ENST00000584908 A0A0G2JLM5 398 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 ANKRD20A5PA0PJZ0 165 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 MARCH11A6NNE9 402 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 E7EUB6 86 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 UPK2O00526 184 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 OR8U8P0C7N1 319 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 HLA-GP17693 338 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 LPAR6P43657 344 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
ERBB2-222ENST00000584908 KLK9Q2XQG4 91 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 TBC1D26Q86UD7 250 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 MRGPRFQ96AM1 343 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 KLK9Q9UKQ9 250 aa12.57□□□□□ -0.4
ERBB2-222ENST00000584908 TRBV9A0A0B4J1U6 114 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 NPIPB5A8MRT5 1133 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 AKAIN1P0CW23 69 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 EGFEM1PQ0D2K5 195 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 FOXB2Q5VYV0 432 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 CCDC190Q86UF4 302 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 SLC25A42Q86VD7 318 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 DMBX1Q8NFW5 382 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 OR5B12Q96R08 314 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 ALX4Q9H161 411 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms