RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	EXOSC2	Q13868	293 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TATDN3	Q17R31	274 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	C19orf35	Q6ZS72	473 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	FAM223A	Q8IWN6	122 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	SPAG16	Q8N0X2	631 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	PUSL1	Q8N0Z8	303 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TTC9C	Q8N5M4	171 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TMEM167A	Q8TBQ9	72 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	HRASLS	Q9HDD0	168 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	EHF	Q9NZC4	300 aa		10.42	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TEX22	C9J3V5	150 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	IGLV1-51	P01701	117 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	PMP2	P02689	132 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	IL6R	P08887	468 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	FRMD6-AS1	P0C7T7	363 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	MYOD1	P15172	320 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	RFX2	P48378	723 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	CATR1	Q13166	79 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	C15orf32	Q32M92	178 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	ZNF818P	Q6ZRF7	136 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	SLC25A42	Q86VD7	318 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	SBSPON	Q8IVN8	264 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	NECAP1	Q8NC96	275 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	ZBTB34	Q8NCN2	500 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	OR51H1	Q8NH63	302 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	GIMAP1	Q8WWP7	306 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TENM3	Q9P273	2699 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	SORL1	Q92673	2214 aa		10.41	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TNC	P24821	2201 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	TRBV9	A0A0B4J1U6	114 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186		E7EUB6	86 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	REG1A	P05451	166 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	AREG	P15514	252 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	MAS1L	P35410	378 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	NCS1	P62166	190 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	RPL8	P62917	257 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	MSMO1	Q15800	293 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	AADACL3	Q5VUY0	350 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	OR4A47	Q6IF82	309 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	IL34	Q6ZMJ4	242 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	SLC25A46	Q96AG3	418 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	FUNDC2	Q9BWH2	189 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	COMMD3	Q9UBI1	195 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	ZNF257	Q9Y2Q1	563 aa		10.4	□□□□□ -0.74
CDK5RAP3-233	ENST00000584186	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.4	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186		A0A1B0GW64	132 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PPP5D1	E7EU14	171 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	BMPR1B	O00238	502 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	IGHV3-23	P01764	117 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CSN3	P07498	182 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RPA2	P15927	270 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HLA-G	P17693	338 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PRSS3	P35030	304 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	VBP1	P61758	197 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	DMBX1	Q8NFW5	382 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	OR5H2	Q8NGV7	314 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	AIFM2	Q9BRQ8	373 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	SLC2A9	Q9NRM0	540 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FBXL7	Q9UJT9	491 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186		S4R3C0	116 aa		10.39	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	SMIM31	A0A1B0GVY4	71 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	NPIPB5	A8MRT5	1133 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186		H0Y980	276 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	S1PR2	O95136	353 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HPRT1	P00492	218 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HLA-A	P01891	365 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RLN1	P04808	185 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	EIF4E	P06730	217 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ZNF735	P0CB33	412 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	DEFA4	P12838	97 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	NQO2	P16083	231 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HLA-DMA	P28067	261 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PSMB6	P28072	239 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	GNRHR	P30968	328 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	TAS2R31	P59538	309 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	TAS2R46	P59540	309 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	OR4A5	Q8NH83	315 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	KCTD12	Q96CX2	325 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	BET1L	Q9NYM9	111 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PEMT	Q9UBM1	199 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	NBEAL2	Q6ZNJ1	2754 aa		10.38	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	TRAV3	A0A0B4J244	114 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	NDUFB8	O95169	186 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	DHFR	P00374	187 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	IGHV4-30-4	P0DP06	118 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	LCN12	Q6JVE5	192 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	DHRS11	Q6UWP2	260 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	SNX29P2	Q8IUI4	249 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	SGPP2	Q8IWX5	399 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CD300LF	Q8TDQ1	290 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	BORCS5	Q969J3	196 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	MOB3A	Q96BX8	217 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RCHY1	Q96PM5	261 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	COMMD5	Q9GZQ3	224 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	TMEM140	Q9NV12	185 aa		10.37	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	IZUMO1R	A6ND01	250 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms