RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 LINC00311Q8N616 119 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 C5orf30Q96GV9 206 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 NAA60Q9H7X0 242 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 SDHAF2Q9NX18 166 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 PIPOXQ9P0Z9 390 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 SAA2-SAA4A0A096LPE2 208 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 C9orf170A2RU37 121 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 SNRPGP15A8MWD9 76 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 RAB29O14966 203 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 MPPED1O15442 326 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 PGLYRP1O75594 196 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-206ENST00000583741 IGKV1D-33P01593 117 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 IGKV1-33P01594 117 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 RPLP1P05386 114 aaKnown RBP16.03■□□□□ 0.16
SRSF1-206ENST00000583741 SAA2P0DJI9 122 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-206ENST00000583741 SUPT4H1P63272 117 aaKnown RBP16.03■□□□□ 0.16
SRSF1-206ENST00000583741 TBC1D26Q86UD7 250 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-206ENST00000583741 OR10X1Q8NGY0 326 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 ZNF431Q8TF32 576 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-206ENST00000583741 GPHA2Q96T91 129 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 ASCL2Q99929 193 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 OR51J1Q9H342 316 aa16.03■□□□□ 0.16
SRSF1-206ENST00000583741 C3orf84H3BNL1 204 aa16.02■□□□□ 0.15
SRSF1-206ENST00000583741 SFT2D2O95562 160 aa16.02■□□□□ 0.15
SRSF1-206ENST00000583741 FOXRED2Q8IWF2 684 aa16.02■□□□□ 0.15
SRSF1-206ENST00000583741 ODF3L1Q8IXM7 274 aa16.02■□□□□ 0.15
SRSF1-206ENST00000583741 GAB2Q9UQC2 676 aa16.02■□□□□ 0.15
SRSF1-206ENST00000583741 KCNIP3Q9Y2W7 256 aa16.02■□□□□ 0.15
SRSF1-206ENST00000583741 RPL39P5Q59GN2 51 aa16.01■□□□□ 0.15
SRSF1-206ENST00000583741 CADM3Q8N126 398 aa16.01■□□□□ 0.15
SRSF1-206ENST00000583741 OR8H3Q8N146 312 aa16.01■□□□□ 0.15
SRSF1-206ENST00000583741 CASTOR1Q8WTX7 329 aa16.01■□□□□ 0.15
SRSF1-206ENST00000583741 GALNT14Q96FL9 552 aa16.01■□□□□ 0.15
SRSF1-206ENST00000583741 C3orf85A0A1B0GTC6 90 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 SSNA1O43805 119 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 OR5AC1P0C628 307 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 ANXA3P12429 323 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 IL3RAP26951 378 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 EIF4EBP1Q13541 118 aaPredicted RBP16■□□□□ 0.15
SRSF1-206ENST00000583741 TEX38Q6PEX7 206 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 KCTD9Q7L273 389 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 OR51H1Q8NH63 302 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 S1PR3Q99500 378 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 HSD17B10Q99714 261 aaKnown RBP16■□□□□ 0.15
SRSF1-206ENST00000583741 ZNF251Q9BRH9 671 aa16■□□□□ 0.15
SRSF1-206ENST00000583741 M0R1X1 148 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 PROP1O75360 226 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 F2RP25116 425 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 BCAP31P51572 246 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 CATR1Q13166 79 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 C9orf66Q5T8R8 295 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 ZNF66Q6ZN08 573 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 OR5M8Q8NGP6 311 aa15.99■□□□□ 0.15
SRSF1-206ENST00000583741 LIN7CQ9NUP9 197 aaKnown RBP15.99■□□□□ 0.15
SRSF1-206ENST00000583741 IGHV3-72A0A0B4J1Y9 119 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 H0Y980 276 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 EBI3Q14213 229 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 SP6Q3SY56 376 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 ZNF833PQ6ZTB9 187 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 C12orf45Q8N5I9 185 aaPredicted RBP15.98■□□□□ 0.15
SRSF1-206ENST00000583741 MITD1Q8WV92 249 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 TP53RKQ96S44 253 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 PHB2Q99623 299 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 MED28Q9H204 178 aa15.98■□□□□ 0.15
SRSF1-206ENST00000583741 SEC14L6B5MCN3 397 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 AP4M1O00189 453 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 B3GALNT1O75752 331 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 DUTP33316 252 aaKnown RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 REG1BP48304 166 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 ZNF137PP52743 207 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 RRAS2P62070 204 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 FAM71F2Q6NXP2 309 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 TGIF2LXQ8IUE1 241 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 Q8N6K4 173 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 TCTEX1D2Q8WW35 142 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 EAF1Q96JC9 268 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 BIRC6Q9NR09 4857 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 IGHV1-3A0A0C4DH29 117 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 NCBP2LA6PVI3 153 aaKnown RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 LINC00473A8K010 186 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 CDX1P47902 265 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 RPL30P62888 115 aaKnown RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 ZNF816Q0VGE8 651 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 TMEM187Q14656 261 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 ANKRD55Q3KP44 614 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 CXorf66Q5JRM2 361 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 RNF152Q8N8N0 203 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 DRAXINQ8NBI3 349 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-206ENST00000583741 UXS1Q8NBZ7 420 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 COQ8AQ8NI60 647 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 GLYATL2Q8WU03 294 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 ST6GALNAC6Q969X2 333 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 TMEM222Q9H0R3 208 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 PRR13Q9NZ81 148 aa15.97■□□□□ 0.15
SRSF1-206ENST00000583741 SORL1Q92673 2214 aa15.96■□□□□ 0.15
SRSF1-206ENST00000583741 FOXE3Q13461 319 aa15.96■□□□□ 0.14
SRSF1-206ENST00000583741 CASC10Q5T4H9 136 aa15.96■□□□□ 0.14
SRSF1-206ENST00000583741 LIN54Q6MZP7 749 aa15.96■□□□□ 0.14
SRSF1-206ENST00000583741 MOB3BQ86TA1 216 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms