RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 AANATQ16613 207 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 MORN2Q502X0 79 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 CCDC144NLQ6NUI1 221 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 TMEM86BQ8N661 226 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 SGMS2Q8NHU3 365 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 SSMEM1Q8WWF3 244 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 LEAP2Q969E1 77 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 SLC25A31Q9H0C2 315 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 ZNRD1Q9P1U0 126 aa10.89□□□□□ -0.67
CSNK1D-220ENST00000581737 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 FAM90A26D6RGX4 464 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 RAB29O14966 203 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 MED6O75586 246 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 IGHV3-7P01780 117 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 ERVK-16P61578 105 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 LRRC75BQ2VPJ9 315 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 NMSQ5H8A3 153 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 Q6YL49 198 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 SLC25A48Q6ZT89 311 aaKnown RBP10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 LHFPL4Q7Z7J7 247 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 ZNF439Q8NDP4 499 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 OR5R1Q8NH85 324 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 LRRC20Q8TCA0 184 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 SCARB1Q8WTV0 552 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 RPEQ96AT9 228 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 S1PR3Q99500 378 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 ZNF471Q9BX82 626 aaPredicted RBP10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 MEGF9Q9H1U4 602 aa10.88□□□□□ -0.67
CSNK1D-220ENST00000581737 RNF222A6NCQ9 220 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 CLDN34H7C241 214 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.673e-9■■■■■ 32.5
CSNK1D-220ENST00000581737 TXNL1O43396 289 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 RPL12P30050 165 aaKnown RBP10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 THBS3P49746 956 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 SSX2Q16385 188 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 TPTE2P1Q5T6R2 138 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 SPAG16Q8N0X2 631 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 OR4D5Q8NGN0 318 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 COA4Q9NYJ1 87 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 MMP24Q9Y5R2 645 aa10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 SOX21Q9Y651 276 aaPredicted RBP10.87□□□□□ -0.67
CSNK1D-220ENST00000581737 BORCS7-ASMTA0A0B4J1R7 106 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 DNAJC9-AS1A6NH13 148 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 MPTX1A8MV57 137 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 ATP6V1G1O75348 118 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 S100A1P23297 94 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 BRS3P32247 399 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 HTR2BP41595 481 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 LPAR6P43657 344 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 ZNF137PP52743 207 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 RPL23AP62750 156 aaKnown RBP10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 EXOSC2Q13868 293 aaKnown RBP10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 PDLIM3Q53GG5 364 aaPredicted RBP10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 CT45A1Q5HYN5 189 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 UTF1Q5T230 341 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 C5orf24Q7Z6I8 188 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 OR8H3Q8N146 312 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 OR4S2Q8NH73 311 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 CT45A3Q8NHU0 189 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 STOML3Q8TAV4 291 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 AJUBAQ96IF1 538 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 RAB40CQ96S21 281 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 CLCC1Q96S66 551 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 SDHAF2Q9NX18 166 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 HILPDAQ9Y5L2 63 aa10.86□□□□□ -0.67
CSNK1D-220ENST00000581737 A0A1W2PPE3 182 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 FAM90A9PA6NNJ1 464 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 LY6LH3BQJ8 138 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 TRIM77I1YAP6 450 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 M0R1X1 148 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 HOXA3O43365 443 aaPredicted RBP10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 JTBO76095 146 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 HPRT1P00492 218 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 GAPDHP04406 335 aaKnown RBP10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 IER3P46695 156 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 DYNLT3P51808 116 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 BAXQ07812 192 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 CLLU1Q5K131 121 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 PRR31Q5SQ13 230 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 LDLRAD2Q5SZI1 272 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 DHRS7BQ6IAN0 325 aaPredicted RBP10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 FAM71F2Q6NXP2 309 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 LYG1Q8N1E2 194 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 C17orf50Q8WW18 174 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 ST8SIA2Q92186 375 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 SSX3Q99909 188 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 OR5AC2Q9NZP5 309 aa10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
CSNK1D-220ENST00000581737 SLC31A2O15432 143 aa10.84□□□□□ -0.67
CSNK1D-220ENST00000581737 SPDEFO95238 335 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms