RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 TRAV3A0A0B4J244 114 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 TEX22C9J3V5 150 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 GABARAPH6UMI1 98 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 GPR31O00270 319 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 TRGV3P03979 118 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 LGALS1P09382 135 aaKnown RBP15.56■□□□□ 0.08
SS18-218ENST00000581021 TSPAN5P62079 268 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 POU2AF1Q16633 256 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 LHFPL1Q86WI0 220 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 ADAD2Q8NCV1 583 aaKnown RBP15.56■□□□□ 0.08
SS18-218ENST00000581021 SMIM4Q8WVI0 70 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 FCAMRQ8WWV6 532 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 DIRAS2Q96HU8 199 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 RSRP1Q9BUV0 290 aa15.56■□□□□ 0.08
SS18-218ENST00000581021 CGB1A6NKQ9 187 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 CD74P04233 296 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 IL6RP08887 468 aaPredicted RBP15.55■□□□□ 0.08
SS18-218ENST00000581021 HOXD3P31249 432 aaPredicted RBP15.55■□□□□ 0.08
SS18-218ENST00000581021 KRTAP10-11P60412 298 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 ZNF585BQ52M93 769 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 RNASE10Q5GAN6 216 aaKnown RBP15.55■□□□□ 0.08
SS18-218ENST00000581021 C19orf35Q6ZS72 473 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 OR1N2Q8NGR9 330 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 MCFD2Q8NI22 146 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 SOSTQ9BQB4 213 aa15.55■□□□□ 0.08
SS18-218ENST00000581021 IGHV4OR15-8A0A075B7B6 117 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 A0A087WW49 117 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 HMX3A6NHT5 357 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 HPRT1P00492 218 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 HRASP01112 189 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 PRH1P02810 166 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 RPA2P15927 270 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 TNFSF8P32971 234 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 TAS2R31P59538 309 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 ZNF45Q02386 682 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 FAAP20Q6NZ36 180 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 TMEM229BQ8NBD8 167 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 VSTM2AQ8TAG5 236 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 C15orf40Q8WUR7 153 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 BORCS5Q969J3 196 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 MRGPRFQ96AM1 343 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 PHB2Q99623 299 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 SLA2Q9H6Q3 261 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 PLEKHA2Q9HB19 425 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 ZNF355PQ9NSJ1 428 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 BET1LQ9NYM9 111 aa15.54■□□□□ 0.08
SS18-218ENST00000581021 TGP01266 2768 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 CCDC160A6NGH7 325 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 H3BUA1 57 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 CTDSPLO15194 276 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 CREBL2O60519 120 aaPredicted RBP15.53■□□□□ 0.08
SS18-218ENST00000581021 ZNF735P0CB33 412 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 TBPP20226 339 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 F2RP25116 425 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 UCP3P55916 312 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 ZNF616Q08AN1 781 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 IL18Q14116 193 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 DGCR14Q96DF8 476 aaKnown RBP15.53■□□□□ 0.08
SS18-218ENST00000581021 TMEM68Q96MH6 324 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 TMEM140Q9NV12 185 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 COA4Q9NYJ1 87 aa15.53■□□□□ 0.08
SS18-218ENST00000581021 RSL24D1Q9UHA3 163 aaKnown RBP15.53■□□□□ 0.08
SS18-218ENST00000581021 ACTL6BO94805 426 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 BRI3O95415 125 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 OR9G9P0C7N8 305 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 NQO2P16083 231 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 HLA-GP17693 338 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 PI3P19957 117 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 SLURP1P55000 103 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 RPL8P62917 257 aaKnown RBP15.52■□□□□ 0.08
SS18-218ENST00000581021 MRPS10P82664 201 aaKnown RBP15.52■□□□□ 0.08
SS18-218ENST00000581021 TBC1D26Q86UD7 250 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 CMTM1Q8IZ96 169 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 SLC38A6Q8IZM9 456 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 ARRDC1Q8N5I2 433 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 CD300LFQ8TDQ1 290 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 SPIN2AQ99865 258 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 SPIN2BQ9BPZ2 258 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 AURKAIP1Q9NWT8 199 aaPredicted RBP15.52■□□□□ 0.08
SS18-218ENST00000581021 COMMD9Q9P000 198 aa15.52■□□□□ 0.08
SS18-218ENST00000581021 UPK2O00526 184 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 DUS4LO95620 317 aaKnown RBP15.51■□□□□ 0.07
SS18-218ENST00000581021 RAB3DO95716 219 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 AREGP15514 252 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 LPAR6P43657 344 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 RPL27AP46776 148 aaKnown RBP15.51■□□□□ 0.07
SS18-218ENST00000581021 TAS2R19P59542 299 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 EGFEM1PQ0D2K5 195 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 STEAP1BQ6NZ63 245 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 HRASLSQ9HDD0 168 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 SLC2A9Q9NRM0 540 aa15.51■□□□□ 0.07
SS18-218ENST00000581021 MPPED1O15442 326 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 IGKV1-39P01597 117 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 IGKV1D-39P04432 117 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 IFNA6P05013 189 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 OR8U8P0C7N1 319 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 CD40LGP29965 261 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 MAS1LP35410 378 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 PPP5CP53041 499 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 OR2B8PP59922 312 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms