RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 OR8G2PQ6IF36 304 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 EIF5AL1Q6IS14 154 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HCP5Q6MZN7 132 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 STPG2Q8N412 459 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OR52E5Q8NH55 327 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RNF141Q8WVD5 230 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LHX4Q969G2 390 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 CIB3Q96Q77 187 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 FOXA2Q9Y261 457 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PLXNB1O43157 2135 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ANKRD34BA5PLL1 514 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 A8MXK9 166 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 UPK2O00526 184 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SPP1P10451 314 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ATP5J2P56134 94 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RUNX1Q01196 453 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PDLIM3Q53GG5 364 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PUSL1Q8N0Z8 303 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OR4C13Q8NGP0 309 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 FLYWCH2Q96CP2 140 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MMP26Q9NRE1 261 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 BET1LQ9NYM9 111 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 AMMECR1Q9Y4X0 333 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 USP9YO00507 2555 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 CELSR2Q9HCU4 2923 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IGHV1-3A0A0C4DH29 117 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ARG1P05089 322 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PRTN3P24158 256 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 VDAC2P45880 294 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SULT1A2P50226 295 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RAB13P51153 203 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 VMO1Q7Z5L0 202 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LILRB2Q8N423 598 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 KIR3DL3Q8N743 410 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 FAM168AQ92567 244 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RPEQ96AT9 228 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PIMREGQ9BSJ6 248 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MED9Q9NWA0 146 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 CENPEQ02224 2701 aa11.99□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IGHV2-70DA0A0C4DH43 119 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 C15orf62A8K5M9 175 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ZNF705EA8MWA4 302 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 DFFBO76075 338 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 KBTBD11O94819 623 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SEC11BP0C7V7 166 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 COL8A1P27658 744 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HOXA1P49639 335 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HBG1P69891 147 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HBG2P69892 147 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OR11H6Q8NGC7 330 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 C10orf105Q8TEF2 133 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PERPQ96FX8 193 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 REG4Q9BYZ8 158 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MS4A7Q9GZW8 240 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PFDN2Q9UHV9 154 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TENM4Q6N022 2769 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 NAV3Q8IVL0 2385 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 A0A1W2PRD5 423 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 A0A1W2PRF3 423 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 A0A1W2PRM7 423 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ODF3BA8MYP8 253 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LY6LH3BQJ8 138 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IGLV2-23P01705 113 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MOB3BQ86TA1 216 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RITA1Q96K30 269 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SIRPDQ9H106 197 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PRNDQ9UKY0 176 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OR51B2Q9Y5P1 312 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 INSIG2Q9Y5U4 225 aa11.98□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IGHV4-61A0A0C4DH41 118 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 A0A1W2PPI3 338 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 FAM157AC9JC47 383 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OPN1MWP04001 364 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OPN1MW2P0DN77 364 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OPN1MW3P0DN78 364 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MC5RP33032 325 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HSPE1P61604 102 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 AANATQ16613 207 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TMEM182Q6ZP80 229 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LHFPL4Q7Z7J7 247 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LRRC20Q8TCA0 184 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TSNAXQ99598 290 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LPAR2Q9HBW0 351 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HEYLQ9NQ87 328 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
CDK5RAP3-218ENST00000580391 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RNASEK-C17orf49H0YIS7 233 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PAX6P26367 422 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HTR1DP28221 377 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TPTE2P1Q5T6R2 138 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SLC25A24Q6NUK1 477 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 CLEC2AQ6UVW9 174 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms