RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 FAM103A1Q9BTL3 118 aaKnown RBP7.85□□□□□ -1.15
MKS1-208ENST00000579358 ZNF430Q9H8G1 570 aaPredicted RBP7.85□□□□□ -1.15
MKS1-208ENST00000579358 SLC2A9Q9NRM0 540 aa7.85□□□□□ -1.15
MKS1-208ENST00000579358 H3BUA1 57 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 ACTL6BO94805 426 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 S1PR2O95136 353 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 RPLP1P05386 114 aaKnown RBP7.84□□□□□ -1.15
MKS1-208ENST00000579358 PF4V1P10720 104 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 MAS1LP35410 378 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 FAUP35544 74 aaKnown RBP7.84□□□□□ -1.15
MKS1-208ENST00000579358 CDX1P47902 265 aaPredicted RBP7.84□□□□□ -1.15
MKS1-208ENST00000579358 PPP5CP53041 499 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 TNXAQ16473 311 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 FAAP20Q6NZ36 180 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 TMEM65Q6PI78 240 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 TBC1D26Q86UD7 250 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 VKORC1L1Q8N0U8 176 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 LFNGQ8NES3 379 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 FAM110DQ8TAY7 271 aaPredicted RBP7.84□□□□□ -1.15
MKS1-208ENST00000579358 SRSF12Q8WXF0 261 aaKnown RBP7.84□□□□□ -1.15
MKS1-208ENST00000579358 SRRQ9GZT4 340 aa7.84□□□□□ -1.15
MKS1-208ENST00000579358 A6NHS1 94 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 MARCH11A6NNE9 402 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 NUDT19A8MXV4 375 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 H0Y980 276 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 MPPED1O15442 326 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 SOX15O60248 233 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 B3GALNT1O75752 331 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 BRI3O95415 125 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 CTSDP07339 412 aaPredicted RBP7.83□□□□□ -1.16
MKS1-208ENST00000579358 IL6RP08887 468 aaPredicted RBP7.83□□□□□ -1.16
MKS1-208ENST00000579358 CD40LGP29965 261 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 RAB9AP51151 201 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 PIGPP57054 158 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 ERVK-16P61578 105 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 RPL8P62917 257 aaKnown RBP7.83□□□□□ -1.16
MKS1-208ENST00000579358 KLF9Q13886 244 aaPredicted RBP7.83□□□□□ -1.16
MKS1-208ENST00000579358 ZNF585BQ52M93 769 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 OR4A47Q6IF82 309 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 SSX9Q7RTT3 188 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 ZNF695Q8IW36 515 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 TOMM5Q8N4H5 51 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 GDPD1Q8N9F7 314 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 CCDC71LQ8N9Z2 235 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 KLHL30-AS1Q8NEE0 82 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 OR13C8Q8NGS7 320 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 C4orf3Q8WVX3 66 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 MRGPRFQ96AM1 343 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 UBE2E2Q96LR5 201 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 SPIN2AQ99865 258 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 SPIN2BQ9BPZ2 258 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 SLA2Q9H6Q3 261 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 SCP2D1Q9UJQ7 156 aa7.83□□□□□ -1.16
MKS1-208ENST00000579358 MSGN1A6NI15 193 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 PF4P02776 101 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 RPA2P15927 270 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 HLA-GP17693 338 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 PI3P19957 117 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 MYCNOSP40205 109 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 LPAR6P43657 344 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 RPL27AP46776 148 aaKnown RBP7.82□□□□□ -1.16
MKS1-208ENST00000579358 KIAA0141Q14154 515 aaPredicted RBP7.82□□□□□ -1.16
MKS1-208ENST00000579358 ASPHD1Q5U4P2 390 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 TET2Q6N021 2002 aaPredicted RBP7.82□□□□□ -1.16
MKS1-208ENST00000579358 LINC00299Q6ZSB3 139 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 LCNL1Q6ZST4 164 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 DMBX1Q8NFW5 382 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 OR51S1Q8NGJ8 323 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 MARCH1Q8TCQ1 289 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 SCGB3A2Q96PL1 93 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 PHB2Q99623 299 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 KLK15Q9H2R5 256 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 HRASLSQ9HDD0 168 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 BATF3Q9NR55 127 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 TMEM140Q9NV12 185 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 COPZ2Q9P299 210 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 GPR132Q9UNW8 380 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 C14orf166Q9Y224 244 aaKnown RBP7.82□□□□□ -1.16
MKS1-208ENST00000579358 VSIG4Q9Y279 399 aa7.82□□□□□ -1.16
MKS1-208ENST00000579358 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 TEX22C9J3V5 150 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 UPK2O00526 184 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 SERPINE2P07093 398 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 RUNX1Q01196 453 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 ZNF45Q02386 682 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 C10orf55Q5SWW7 151 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 THOC7Q6I9Y2 204 aaKnown RBP7.81□□□□□ -1.16
MKS1-208ENST00000579358 ETV3LQ6ZN32 361 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 C18orf65Q6ZTR6 163 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 SLC25A42Q86VD7 318 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 ADAD2Q8NCV1 583 aaKnown RBP7.81□□□□□ -1.16
MKS1-208ENST00000579358 WFDC9Q8NEX5 89 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 P2RX4Q99571 388 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 SRSF8Q9BRL6 282 aaKnown RBP7.81□□□□□ -1.16
MKS1-208ENST00000579358 MCUBQ9NWR8 336 aa7.81□□□□□ -1.16
MKS1-208ENST00000579358 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
MKS1-208ENST00000579358 I3L521 148 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms