RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 DIRAS2Q96HU8 199 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 RHOVQ96L33 236 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 OR2A7Q96R45 310 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 RSRP1Q9BUV0 290 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 CD3DP04234 171 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 RLN1P04808 185 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 CD40LGP29965 261 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 TAS2R19P59542 299 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 LHFPL1Q86WI0 220 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 CMTM1Q8IZ96 169 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 SLC38A6Q8IZM9 456 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 TMEM229BQ8NBD8 167 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 OR4A5Q8NH83 315 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 MCFD2Q8NI22 146 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 CASTOR1Q8WTX7 329 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
MKS1-207ENST00000578789 PLEKHA2Q9HB19 425 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 BET1LQ9NYM9 111 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 COMMD9Q9P000 198 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
MKS1-207ENST00000578789 NOTCH3Q9UM47 2321 aa11.22□□□□□ -0.61
MKS1-207ENST00000578789 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 ACTL6BO94805 426 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 IL6RP08887 468 aaPredicted RBP11.21□□□□□ -0.61
MKS1-207ENST00000578789 FGF2P09038 288 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.61
MKS1-207ENST00000578789 F2RP25116 425 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 MAS1LP35410 378 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 TPPP2P59282 170 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 IL18Q14116 193 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 C10orf55Q5SWW7 151 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 PHB2Q99623 299 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 SOSTQ9BQB4 213 aa11.21□□□□□ -0.61
MKS1-207ENST00000578789 FAM212BQ9NTI7 297 aaPredicted RBP11.21□□□□□ -0.61
MKS1-207ENST00000578789 WIPF1O43516 503 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 GSTZ1O43708 216 aaPredicted RBP11.2□□□□□ -0.62
MKS1-207ENST00000578789 S1PR2O95136 353 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 TRGV3P03979 118 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 IFNA6P05013 189 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 NQO2P16083 231 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 OR4A47Q6IF82 309 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 SSX9Q7RTT3 188 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 ADAD2Q8NCV1 583 aaKnown RBP11.2□□□□□ -0.62
MKS1-207ENST00000578789 OR5T1Q8NG75 326 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 DGCR14Q96DF8 476 aaKnown RBP11.2□□□□□ -0.62
MKS1-207ENST00000578789 SPIN2AQ99865 258 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 SPIN2BQ9BPZ2 258 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
MKS1-207ENST00000578789 GPR61Q9BZJ8 451 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 DNAH3Q8TD57 4116 aa11.2□□□□□ -0.62
MKS1-207ENST00000578789 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 OR8U8P0C7N1 319 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 S100GP29377 79 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 TNFSF8P32971 234 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 RPL27AP46776 148 aaKnown RBP11.19□□□□□ -0.62
MKS1-207ENST00000578789 RND3P61587 244 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 RPL8P62917 257 aaKnown RBP11.19□□□□□ -0.62
MKS1-207ENST00000578789 ZNF616Q08AN1 781 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 ZNF585BQ52M93 769 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 STEAP1BQ6NZ63 245 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 CADM3Q8N126 398 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 OR4D10Q8NGI6 311 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 OR1N2Q8NGR9 330 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
MKS1-207ENST00000578789 MS4A10Q96PG2 267 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 OR5B12Q96R08 314 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
MKS1-207ENST00000578789 A0A1B0GW64 132 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 UPK2O00526 184 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 MPPED1O15442 326 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 RAB3DO95716 219 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 ZNF735P0CB33 412 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 HLA-GP17693 338 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 MEF2DQ14814 521 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 PDLIM3Q53GG5 364 aaPredicted RBP11.18□□□□□ -0.62
MKS1-207ENST00000578789 FOXB2Q5VYV0 432 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 TBC1D26Q86UD7 250 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
MKS1-207ENST00000578789 HRASLSQ9HDD0 168 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 SLC2A9Q9NRM0 540 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 ZNF355PQ9NSJ1 428 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 COA4Q9NYJ1 87 aa11.18□□□□□ -0.62
MKS1-207ENST00000578789 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 MARCH11A6NNE9 402 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 E7EUB6 86 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 APELAP0DMC3 54 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 PTBP1P26599 531 aaKnown RBP eCLIP11.17□□□□□ -0.62
MKS1-207ENST00000578789 LPAR6P43657 344 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 PPP5CP53041 499 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 RAB25P57735 213 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms