RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 COMMD5Q9GZQ3 224 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 UBTD1Q9HAC8 227 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
SKA2-204ENST00000578519 CADP27708 2225 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 A6NNC1 897 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 LYNX1G3V0Z9 82 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 H0YJW9 148 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 CYB5BO43169 146 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 ARG1P05089 322 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 CD5P06127 495 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 SOD3P08294 240 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 IL6RP08887 468 aaPredicted RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 LYNX1P0DP58 116 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 FGF7P21781 194 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 NPY1RP25929 384 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 CD1BP29016 333 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 VDAC2P45880 294 aaPredicted RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 PRCDQ00LT1 54 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 VWC2Q2TAL6 325 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 AVPI1Q5T686 147 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 LY6G5BQ8NDX9 201 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 SUN5Q8TC36 379 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 SFT2D1Q8WV19 159 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 SSBP3Q9BWW4 388 aaPredicted RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 MRPL20Q9BYC9 149 aaKnown RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 MS4A7Q9GZW8 240 aaPredicted RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 NPVFQ9HCQ7 196 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 SLC39A9Q9NUM3 307 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 KIAA1456Q9P272 454 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 CARHSP1Q9Y2V2 147 aaKnown RBP9.08□□□□□ -0.96
SKA2-204ENST00000578519 INSIG2Q9Y5U4 225 aa9.08□□□□□ -0.96
SKA2-204ENST00000578519 IGHV2-26A0A0B4J1V2 119 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 UBE2L5PA0A1B0GUS4 154 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 RBFOX3A6NFN3 312 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 AGPAT2O15120 278 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 MAS1LP35410 378 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 PPT1P50897 306 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 LINC00205P59089 165 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 RPL8P62917 257 aaKnown RBP9.07□□□□□ -0.96
SKA2-204ENST00000578519 ARL16Q0P5N6 197 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 HLA-DRB5Q30154 266 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 C10orf91Q5T1B1 145 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 KIR3DL3Q8N743 410 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 TEX45Q8NA69 505 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 SLC24A4Q8NFF2 622 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 TMEM167AQ8TBQ9 72 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 MBD3L1Q8WWY6 194 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 ST6GALNAC6Q969X2 333 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 RPEQ96AT9 228 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 ACTR3CQ9C0K3 210 aaPredicted RBP9.07□□□□□ -0.96
SKA2-204ENST00000578519 ONECUT1Q9UBC0 465 aa9.07□□□□□ -0.96
SKA2-204ENST00000578519 POLEQ07864 2286 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 PMS2P5A8MQ11 134 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 ENSAO43768 121 aaKnown RBP9.06□□□□□ -0.96
SKA2-204ENST00000578519 ACTL6BO94805 426 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 UQCRFS1P47985 274 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 COMPP49747 757 aaPredicted RBP9.06□□□□□ -0.96
SKA2-204ENST00000578519 RUNX1Q01196 453 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 HAPLN4Q86UW8 402 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 VKORC1L1Q8N0U8 176 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 RSG1Q9BU20 258 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 HINT2Q9BX68 163 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 NKX6-2Q9C056 277 aaPredicted RBP9.06□□□□□ -0.96
SKA2-204ENST00000578519 SLC35B3Q9H1N7 401 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 WDR83OSQ9Y284 106 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 KLF2Q9Y5W3 355 aaPredicted RBP9.06□□□□□ -0.96
SKA2-204ENST00000578519 TANC2Q9HCD6 1990 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 CFAP54Q96N23 3096 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 FREM2Q5SZK8 3169 aa9.06□□□□□ -0.96
SKA2-204ENST00000578519 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 TEX50A0A1B0GTY4 177 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 SMCO3A2RU48 225 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 OOSP1A8MZH6 123 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 BUB1B-PAK6H3BSN5 160 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 NDUFS6O75380 124 aaKnown RBP9.05□□□□□ -0.96
SKA2-204ENST00000578519 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 SAA1P0DJI8 122 aaPredicted RBP9.05□□□□□ -0.96
SKA2-204ENST00000578519 IGFBP2P18065 325 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 HTR1DP28221 377 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 PDLIM4P50479 330 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 KHDC3LQ587J8 217 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 SPINK9Q5DT21 86 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 FFAR4Q5NUL3 377 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 CCDC144NLQ6NUI1 221 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 C1orf229Q6ZS94 237 aaPredicted RBP9.05□□□□□ -0.96
SKA2-204ENST00000578519 MOB3BQ86TA1 216 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 MMD2Q8IY49 270 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 NARFLQ9H6Q4 476 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 DPM3Q9P2X0 92 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 DSCAMO60469 2012 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 SPTBN2O15020 2390 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 CACNA1DQ01668 2161 aa9.05□□□□□ -0.96
SKA2-204ENST00000578519 RAI1Q7Z5J4 1906 aaPredicted RBP9.04□□□□□ -0.96
SKA2-204ENST00000578519 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
SKA2-204ENST00000578519 FCN3O75636 299 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms