RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 RNF223E7ERA6 249 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 TIMM23O14925 209 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 CD1BP29016 333 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 CAV2P51636 162 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 TAS2R30P59541 319 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 PDLIM3Q53GG5 364 aaPredicted RBP14.96□□□□□ -0.01
PRKCA-203ENST00000578063 KRTAP1-3Q8IUG1 177 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 OR4A5Q8NH83 315 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 RNF5Q99942 180 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 ARPC5LQ9BPX5 153 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 RBKSQ9H477 322 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 HIF1ANQ9NWT6 349 aa14.96□□□□□ -0.01
PRKCA-203ENST00000578063 TRAV3A0A0B4J244 114 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 UPK2O00526 184 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 LY86O95711 162 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 SPCS3P61009 180 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 IFITM2Q01629 132 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 VMA21Q3ZAQ7 101 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 CFHR4Q92496 578 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 MALSU1Q96EH3 234 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 SMIM8Q96KF7 97 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 Q96MF0 132 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 CIB3Q96Q77 187 aaPredicted RBP14.95□□□□□ -0.02
PRKCA-203ENST00000578063 SLC25A31Q9H0C2 315 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 TMEM14BQ9NUH8 114 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 FASNP49327 2511 aaKnown RBP14.95□□□□□ -0.02
PRKCA-203ENST00000578063 MED13LQ71F56 2210 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 UNC79Q9P2D8 2635 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 CENPVL3A0A0U1RRI6 287 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 NPFFO15130 113 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 KBTBD11O94819 623 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 TMEM50AO95807 157 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 IFNA17P01571 189 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 IGLV2-23P01705 113 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 PAX9P55771 341 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 SSX2Q16385 188 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 RBMXL1Q96E39 390 aaKnown RBP14.95□□□□□ -0.02
PRKCA-203ENST00000578063 TSNAXQ99598 290 aaKnown RBP14.95□□□□□ -0.02
PRKCA-203ENST00000578063 C7orf69Q9H7B7 122 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 FKBP11Q9NYL4 201 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 NUP50Q9UKX7 468 aa14.95□□□□□ -0.02
PRKCA-203ENST00000578063 CEBPZOSA8MTT3 80 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 VENTXO95231 258 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 IAPPP10997 89 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 SAA4P35542 130 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 SLC51BQ86UW2 128 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 TMEM167AQ8TBQ9 72 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 DTD1Q8TEA8 209 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 ZNF257Q9Y2Q1 563 aa14.94□□□□□ -0.02
PRKCA-203ENST00000578063 FAM24AA6NFZ4 105 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 TAAR5O14804 337 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 RGS13O14921 159 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 FGF2P09038 288 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 EWSR1Q01844 656 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRKCA-203ENST00000578063 BAXQ07812 192 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 TMEM252Q8N6L7 170 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 PSENENQ9NZ42 101 aa14.93□□□□□ -0.02
PRKCA-203ENST00000578063 IGHV1-69DA0A0B4J2H0 117 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 J3QLI3 93 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 SPDEFO95238 335 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 IGHV1-69P01742 117 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 HSPE1P61604 102 aaKnown RBP14.92□□□□□ -0.02
PRKCA-203ENST00000578063 TEX45Q8NA69 505 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 CLCC1Q96S66 551 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 TCF19Q9Y242 345 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 OR51B2Q9Y5P1 312 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 MAP1AP78559 2803 aaPredicted RBP14.92□□□□□ -0.02
PRKCA-203ENST00000578063 WNK2Q9Y3S1 2297 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 TRAV40A0A0B4J280 105 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 IGSF23A1L1A6 192 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 RPL8P62917 257 aaKnown RBP14.92□□□□□ -0.02
PRKCA-203ENST00000578063 UBA52P62987 128 aaKnown RBP14.92□□□□□ -0.02
PRKCA-203ENST00000578063 TMEM249Q2WGJ8 235 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 STX12Q86Y82 276 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 DYNAPQ8N1N2 210 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 OR8H1Q8NGG4 311 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 OR5B3Q8NH48 314 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 ZDHHC16Q969W1 377 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 ZNF471Q9BX82 626 aaPredicted RBP14.92□□□□□ -0.02
PRKCA-203ENST00000578063 CSMD2Q7Z408 3487 aa14.92□□□□□ -0.02
PRKCA-203ENST00000578063 HECTD1Q9ULT8 2610 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 H3BP45 60 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 SLC25A17O43808 307 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 MOSP00540 346 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 C17orf50Q8WW18 174 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 RITA1Q96K30 269 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 FOXC2Q99958 501 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 FBXL17Q9UF56 701 aa14.91□□□□□ -0.02
PRKCA-203ENST00000578063 IGKV1D-33P01593 117 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 IGKV1-33P01594 117 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 IGHV4-31P0DP07 118 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 TEX261Q6UWH6 196 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 MAPK1IP1LQ8NDC0 245 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 OR2T10Q8NGZ9 312 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 AJUBAQ96IF1 538 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 COMMD5Q9GZQ3 224 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 U3KQ87 197 aa14.9□□□□□ -0.02
PRKCA-203ENST00000578063 TGFAP01135 160 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 HOXA1P49639 335 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms