RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 ID3Q02535 119 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 RTN4RL2Q86UN3 420 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 LOC102723996A0A087X1L8 192 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 C8orf88P0DMB2 117 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 RND2P52198 227 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
RNF43-203ENST00000577716 COL5A1-AS1Q5SY13 56 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 SDF2L1Q9HCN8 221 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 CBLN4Q9NTU7 201 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 A0A087WWC5 75 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 PGPA6NDG6 321 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 VENTXO95231 258 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 CLPSP04118 112 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 CD5P06127 495 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 NUBP1P53384 320 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 MMD2Q8IY49 270 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 SFRP2Q96HF1 295 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 NABP2Q9BQ15 211 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 WFDC1Q9HC57 220 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 DOCK11Q5JSL3 2073 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 CBLN1P23435 193 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 RAB1BQ9H0U4 201 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 FOXJ2Q9P0K8 574 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 TTC28Q96AY4 2481 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 C5orf63A6NC05 138 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 GCHFRP30047 84 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 TFF3Q07654 80 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 ICAM4Q14773 271 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 KHDC1LQ5JSQ8 128 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 Q6ZT83 130 aa9.23□□□□□ -0.93
RNF43-203ENST00000577716 ZNF716A6NP11 495 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 RRHO14718 337 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 IGHV3-48P01763 117 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 SMIM17P0DL12 118 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 PSG7Q13046 419 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 RPL39P5Q59GN2 51 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 ASCL5Q7RTU5 278 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 STPG3Q8N7X2 389 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 ZIC4Q8N9L1 334 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 TMUB1Q9BVT8 246 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 DNAJC4Q9NNZ3 241 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 SLC25A17O43808 307 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 ORM1P02763 201 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 CRYGSP22914 178 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 SRIP30626 198 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 C17orf82Q86X59 251 aaPredicted RBP9.22□□□□□ -0.93
RNF43-203ENST00000577716 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 FGFBP3Q8TAT2 258 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 ZNF430Q9H8G1 570 aaPredicted RBP9.22□□□□□ -0.93
RNF43-203ENST00000577716 COLQQ9Y215 455 aaPredicted RBP9.22□□□□□ -0.93
RNF43-203ENST00000577716 PLXND1Q9Y4D7 1925 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.938e-8■■■□□ 18.9
RNF43-203ENST00000577716 COLCA2A8K830 154 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 CORTO00230 105 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 ABLIM2Q6H8Q1 611 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 OR8B3Q8NGG8 313 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 OR8B2Q96RD0 313 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 DCTN5Q9BTE1 182 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 IDI2-AS1Q9NZ38 188 aa9.22□□□□□ -0.93
RNF43-203ENST00000577716 DLL1O00548 723 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 MC5RP33032 325 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 REC114Q7Z4M0 266 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 PLPPR1Q8TBJ4 325 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 SGK494Q96LW2 274 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 TNFRSF19Q9NS68 423 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 A0A1B0GV90 55 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 ACP7Q6ZNF0 438 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 OR4D5Q8NGN0 318 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 OR13A1Q8NGR1 328 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 CLEC5AQ9NY25 188 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 COA4Q9NYJ1 87 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 ZDHHC8Q9ULC8 765 aa9.21□□□□□ -0.93
RNF43-203ENST00000577716 HELZP42694 1942 aaKnown RBP9.21□□□□□ -0.93
RNF43-203ENST00000577716 ZNF729A6NN14 1252 aaPredicted RBP9.21□□□□□ -0.94
RNF43-203ENST00000577716 C1orf185Q5T7R7 199 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 VWA1Q6PCB0 445 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 DOLPP1Q86YN1 238 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 OR8A1Q8NGG7 326 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 PRDM6Q9NQX0 595 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 IFNL4K9M1U5 179 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 LCN2P80188 198 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 GBGT1Q8N5D6 347 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 NABP1Q96AH0 204 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 SFXN3Q9BWM7 321 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 HSPB8Q9UJY1 196 aa9.21□□□□□ -0.94
RNF43-203ENST00000577716 THADAQ6YHU6 1953 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 KLF7O75840 302 aaPredicted RBP9.2□□□□□ -0.94
RNF43-203ENST00000577716 CECR9P0C854 216 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 ATP5G3P48201 142 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 QRFPP83859 136 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 CENPWQ5EE01 88 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 GATAD1Q8WUU5 269 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 GP6Q9HCN6 339 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 DEPPQ9NTK1 212 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 FOXD3Q9UJU5 478 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms