RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 TMEM68Q96MH6 324 aa11.92□□□□□ -0.5
LITAF-217ENST00000575426 ZNF430Q9H8G1 570 aaPredicted RBP11.92□□□□□ -0.5
LITAF-217ENST00000575426 HRASLSQ9HDD0 168 aa11.92□□□□□ -0.5
LITAF-217ENST00000575426 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
LITAF-217ENST00000575426 COMMD9Q9P000 198 aa11.92□□□□□ -0.5
LITAF-217ENST00000575426 COPZ2Q9P299 210 aa11.92□□□□□ -0.5
LITAF-217ENST00000575426 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
LITAF-217ENST00000575426 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
LITAF-217ENST00000575426 A6NHS1 94 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 MPPED1O15442 326 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 S1PR2O95136 353 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 RPLP1P05386 114 aaKnown RBP11.91□□□□□ -0.5
LITAF-217ENST00000575426 EGR2P11161 476 aaPredicted RBP11.91□□□□□ -0.5
LITAF-217ENST00000575426 MAS1LP35410 378 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 PIGPP57054 158 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 RND3P61587 244 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 PUSL1Q8N0Z8 303 aaKnown RBP11.91□□□□□ -0.5
LITAF-217ENST00000575426 MINDY2Q8NBR6 621 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 OR51S1Q8NGJ8 323 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 OR5M8Q8NGP6 311 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 OR13C8Q8NGS7 320 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 TMEM167AQ8TBQ9 72 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 SCGB3A2Q96PL1 93 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 BATF3Q9NR55 127 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 ZNF355PQ9NSJ1 428 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
LITAF-217ENST00000575426 BET1LQ9NYM9 111 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
LITAF-217ENST00000575426 MSGN1A6NI15 193 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 ADARB2-AS1A8MUL3 147 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 IGLV1-40P01703 118 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 PF4P02776 101 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 SERPINE2P07093 398 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 CTSDP07339 412 aaPredicted RBP11.9□□□□□ -0.5
LITAF-217ENST00000575426 PI3P19957 117 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 PSMB8P28062 276 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 SLC6A1P30531 599 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
LITAF-217ENST00000575426 ZNF57Q68EA5 555 aaPredicted RBP11.9□□□□□ -0.5
LITAF-217ENST00000575426 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 LCNL1Q6ZST4 164 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 GDPD1Q8N9F7 314 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 SRSF12Q8WXF0 261 aaKnown RBP11.9□□□□□ -0.5
LITAF-217ENST00000575426 SRRQ9GZT4 340 aa11.9□□□□□ -0.5
LITAF-217ENST00000575426 KRASP01116 189 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 CDX1P47902 265 aaPredicted RBP11.89□□□□□ -0.51
LITAF-217ENST00000575426 RAB9AP51151 201 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 RPL8P62917 257 aaKnown RBP11.89□□□□□ -0.51
LITAF-217ENST00000575426 ZNF45Q02386 682 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 POU2AF1Q16633 256 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 MRGPRG-AS1Q2M3A8 158 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 TRIQKQ629K1 86 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 OR5T1Q8NG75 326 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 DEDD2Q8WXF8 326 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 TRIM63Q969Q1 353 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 SPIN2AQ99865 258 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 SPIN2BQ9BPZ2 258 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
LITAF-217ENST00000575426 TEX13DA0A0J9YY54 714 aaPredicted RBP11.88□□□□□ -0.51
LITAF-217ENST00000575426 C3orf85A0A1B0GTC6 90 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 MARCH11A6NNE9 402 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 UPK2O00526 184 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 RPA2P15927 270 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 G6PCP35575 357 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 RPL27AP46776 148 aaKnown RBP11.88□□□□□ -0.51
LITAF-217ENST00000575426 SSBP2P81877 361 aaPredicted RBP11.88□□□□□ -0.51
LITAF-217ENST00000575426 KLF9Q13886 244 aaPredicted RBP11.88□□□□□ -0.51
LITAF-217ENST00000575426 CNPY1Q3B7I2 92 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 C19orf54Q5BKX5 351 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 FYTTD1Q96QD9 318 aaKnown RBP11.88□□□□□ -0.51
LITAF-217ENST00000575426 SLA2Q9H6Q3 261 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 TMEM140Q9NV12 185 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 VSIG4Q9Y279 399 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
LITAF-217ENST00000575426 H0Y980 276 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 H3BUA1 57 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 SNAPC5O75971 98 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 ATG12O94817 140 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 APELAP0DMC3 54 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 HLA-GP17693 338 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 SLC25A42Q86VD7 318 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 COMMD5Q9GZQ3 224 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 KLK15Q9H2R5 256 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 GPR132Q9UNW8 380 aa11.87□□□□□ -0.51
LITAF-217ENST00000575426 SOX15O60248 233 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 TRGV3P03979 118 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 OR9G9P0C7N8 305 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 TPPP2P59282 170 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 TRIM16LQ309B1 348 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms