RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 CENPVQ7Z7K6 275 aaPredicted RBP15.32■□□□□ 0.04
SPNS3-204ENST00000575194 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
SPNS3-204ENST00000575194 RHOVQ96L33 236 aa15.32■□□□□ 0.04
SPNS3-204ENST00000575194 SLC35B3Q9H1N7 401 aa15.32■□□□□ 0.04
SPNS3-204ENST00000575194 SLC35D1Q9NTN3 355 aa15.32■□□□□ 0.04
SPNS3-204ENST00000575194 CTSZQ9UBR2 303 aa15.32■□□□□ 0.04
SPNS3-204ENST00000575194 LRBAP50851 2863 aa15.32■□□□□ 0.04
SPNS3-204ENST00000575194 RBFOX3A6NFN3 312 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 C9JQL5 133 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 TSPAN4O14817 238 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 APOA2P02652 100 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 CCL3L1P16619 93 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 LOXP28300 417 aaPredicted RBP15.31■□□□□ 0.04
SPNS3-204ENST00000575194 LINC00311Q8N616 119 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 HEYLQ9NQ87 328 aaPredicted RBP15.31■□□□□ 0.04
SPNS3-204ENST00000575194 FASNP49327 2511 aaKnown RBP15.31■□□□□ 0.04
SPNS3-204ENST00000575194 A0A1B0GV50 99 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 C15orf62A8K5M9 175 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 SIAH2O43255 324 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 MBP02144 154 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 FGF7P21781 194 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 HOXA1P49639 335 aaPredicted RBP15.31■□□□□ 0.04
SPNS3-204ENST00000575194 SPINK9Q5DT21 86 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 OR4A47Q6IF82 309 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 VKORC1L1Q8N0U8 176 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 UNKLQ9H9P5 680 aaKnown RBP15.31■□□□□ 0.04
SPNS3-204ENST00000575194 ENY2Q9NPA8 101 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 PRNDQ9UKY0 176 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 CRYBG3Q68DQ2 2970 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 PKDREJQ9NTG1 2253 aa15.31■□□□□ 0.04
SPNS3-204ENST00000575194 ICE1Q9Y2F5 2266 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 C17orf112F2Z3M2 114 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 FCN3O75636 299 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 CT45A6P0DMU7 189 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 CT45A5P0DMU8 189 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 CT45A7P0DMV0 189 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 TMEM155Q4W5P6 130 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 ZNF709Q8N972 641 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 ZNF596Q8TC21 504 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 C17orf50Q8WW18 174 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 GGACTQ9BVM4 153 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 TMEM14BQ9NUH8 114 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 TCF19Q9Y242 345 aa15.3■□□□□ 0.04
SPNS3-204ENST00000575194 CENPEQ02224 2701 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 SOX15O60248 233 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 IFNA10P01566 189 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 VDAC2P45880 294 aaPredicted RBP15.29■□□□□ 0.04
SPNS3-204ENST00000575194 RAB11AP62491 216 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 SP5Q6BEB4 398 aaPredicted RBP15.29■□□□□ 0.04
SPNS3-204ENST00000575194 CLRN3Q8NCR9 226 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 OR13D1Q8NGV5 346 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 MBD3L1Q8WWY6 194 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 RPRMQ9NS64 109 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 FAM74A7A6NL05 159 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 NPBWR1P48145 328 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 HSPE1P61604 102 aaKnown RBP15.29■□□□□ 0.04
SPNS3-204ENST00000575194 FAM74A3Q4VXF1 159 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 ZNF506Q5JVG8 444 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 OR10X1Q8NGY0 326 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 OSR1Q8TAX0 266 aaPredicted RBP15.29■□□□□ 0.04
SPNS3-204ENST00000575194 TMEM186Q96B77 213 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
SPNS3-204ENST00000575194 A0A087X0M5 115 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 A0A1B0GX30 115 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 A0A1W2PPH5 198 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 IL3RAP26951 378 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 DLX6P56179 175 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 CCL20P78556 96 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 ZNF787Q6DD87 383 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 FKBP11Q9NYL4 201 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 ZNF257Q9Y2Q1 563 aa15.28■□□□□ 0.04
SPNS3-204ENST00000575194 TRAV3A0A0B4J244 114 aa15.27■□□□□ 0.04
SPNS3-204ENST00000575194 J3QR06 171 aa15.27■□□□□ 0.04
SPNS3-204ENST00000575194 NUPL2O15504 423 aaKnown RBP15.27■□□□□ 0.04
SPNS3-204ENST00000575194 MPDU1O75352 247 aa15.27■□□□□ 0.04
SPNS3-204ENST00000575194 IGHV2-70P01814 119 aa15.27■□□□□ 0.04
SPNS3-204ENST00000575194 HSPB1P04792 205 aaKnown RBP15.27■□□□□ 0.04
SPNS3-204ENST00000575194 ELLP55199 621 aaPredicted RBP15.27■□□□□ 0.04
SPNS3-204ENST00000575194 KHDC3LQ587J8 217 aa15.27■□□□□ 0.04
SPNS3-204ENST00000575194 CLDND2Q8NHS1 167 aa15.27■□□□□ 0.04
SPNS3-204ENST00000575194 RCC1LQ96I51 464 aaKnown RBP15.27■□□□□ 0.04
SPNS3-204ENST00000575194 MRPL20Q9BYC9 149 aaKnown RBP15.27■□□□□ 0.04
SPNS3-204ENST00000575194 YLPM1P49750 1951 aaKnown RBP15.27■□□□□ 0.03
SPNS3-204ENST00000575194 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 F12P00748 615 aaPredicted RBP15.26■□□□□ 0.03
SPNS3-204ENST00000575194 IFNA1P01562 189 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 ETV3LQ6ZN32 361 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 OR9G1Q8NH87 305 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 SPOCK3Q9BQ16 436 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 NPCDR1Q9BY65 106 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 CBLN4Q9NTU7 201 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 BET1LQ9NYM9 111 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 OR51B2Q9Y5P1 312 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 TACC2O95359 2948 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 UPK2O00526 184 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 MDKP21741 143 aaPredicted RBP15.26■□□□□ 0.03
SPNS3-204ENST00000575194 ZNF137PP52743 207 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 DLK1P80370 383 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 SOHLH1Q5JUK2 328 aa15.26■□□□□ 0.03
SPNS3-204ENST00000575194 RARRES2Q99969 163 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms