RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 C5orf66Q9H5L9 145 aa13.55□□□□□ -0.24
LITAF-212ENST00000573332 ZNF430Q9H8G1 570 aaPredicted RBP13.55□□□□□ -0.24
LITAF-212ENST00000573332 COPZ2Q9P299 210 aa13.55□□□□□ -0.24
LITAF-212ENST00000573332 C14orf166Q9Y224 244 aaKnown RBP13.55□□□□□ -0.24
LITAF-212ENST00000573332 NAP1L6A6NFF2 107 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 H0Y980 276 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 ELANEP08246 267 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 RPA2P15927 270 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 MAS1LP35410 378 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 OR4A47Q6IF82 309 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 C11orf44Q8N8P7 122 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 R3HDM4Q96D70 268 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 TMEM68Q96MH6 324 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 CITED2Q99967 270 aaPredicted RBP13.54□□□□□ -0.24
LITAF-212ENST00000573332 C7orf50Q9BRJ6 194 aaKnown RBP13.54□□□□□ -0.24
LITAF-212ENST00000573332 CCDC32Q9BV29 185 aa13.54□□□□□ -0.24
LITAF-212ENST00000573332 C3orf85A0A1B0GTC6 90 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 G3V318 75 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 CNIH1O95406 144 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 OPN1MWP04001 364 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 OPN1MW2P0DN77 364 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 OPN1MW3P0DN78 364 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 CD40LGP29965 261 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 FOXE3Q13461 319 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 SSX9Q7RTT3 188 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 SLC25A21Q9BQT8 299 aaPredicted RBP13.53□□□□□ -0.24
LITAF-212ENST00000573332 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
LITAF-212ENST00000573332 MARCH11A6NNE9 402 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 ADARB2-AS1A8MUL3 147 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 M0QZ24 198 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 IGLV1-40P01703 118 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 PSMB8P28062 276 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 ERVK-16P61578 105 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 TNXAQ16473 311 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 TP53RKQ96S44 253 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.25
LITAF-212ENST00000573332 ZFP57Q9NU63 452 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 VSIG4Q9Y279 399 aa13.52□□□□□ -0.25
LITAF-212ENST00000573332 TSSC4Q9Y5U2 329 aaPredicted RBP13.52□□□□□ -0.25
LITAF-212ENST00000573332 TCRBV4S1A1TA0A5B7 111 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 CRYM-AS1A6NIL9 109 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 UPK2O00526 184 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 ACTL6BO94805 426 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 IGKV1-39P01597 117 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 IGKV1D-39P04432 117 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 SERPINE2P07093 398 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 UCP1P25874 307 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 GNB1P62873 340 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
LITAF-212ENST00000573332 UNQ5815/PRO19632Q6UWF5 114 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 LFNGQ8NES3 379 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 GRPEL2Q8TAA5 225 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 ABHD5Q8WTS1 349 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
LITAF-212ENST00000573332 SEC22AQ96IW7 307 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 WDR12Q9GZL7 423 aaKnown RBP13.51□□□□□ -0.25
LITAF-212ENST00000573332 NAA60Q9H7X0 242 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 TMEM140Q9NV12 185 aa13.51□□□□□ -0.25
LITAF-212ENST00000573332 FOXA2Q9Y261 457 aaPredicted RBP13.51□□□□□ -0.25
LITAF-212ENST00000573332 CENPXA8MT69 81 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 KRASP01116 189 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 ZNF846Q147U1 533 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 C2orf68Q2NKX9 166 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
LITAF-212ENST00000573332 OR5M8Q8NGP6 311 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 MYOZ3Q8TDC0 251 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 TMEM230Q96A57 120 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 GALNT14Q96FL9 552 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 SPIN2AQ99865 258 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 SPIN2BQ9BPZ2 258 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 TMEM222Q9H0R3 208 aa13.5□□□□□ -0.25
LITAF-212ENST00000573332 TEX13DA0A0J9YY54 714 aaPredicted RBP13.49□□□□□ -0.25
LITAF-212ENST00000573332 A0A1W2PN81 502 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 MSGN1A6NI15 193 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 PLA2G10O15496 165 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 SOX15O60248 233 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 BRI3O95415 125 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 HLA-GP17693 338 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 G6PCP35575 357 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 CHRNA7P36544 502 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 DHODHQ02127 395 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 RBMS2Q15434 407 aaKnown RBP13.49□□□□□ -0.25
LITAF-212ENST00000573332 PRR31Q5SQ13 230 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 HIST2H2BDQ6DRA6 164 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 SGPP2Q8IWX5 399 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 ADAD2Q8NCV1 583 aaKnown RBP13.49□□□□□ -0.25
LITAF-212ENST00000573332 GLYATL2Q8WU03 294 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 KCNIP3Q9Y2W7 256 aa13.49□□□□□ -0.25
LITAF-212ENST00000573332 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 H3BUA1 57 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 ATG12O94817 140 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 CDS2O95674 445 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 OR5AC1P0C628 307 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 SLC6A1P30531 599 aa13.48□□□□□ -0.25
LITAF-212ENST00000573332 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms