RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 TAF15Q92804 592 aaKnown RBP eCLIP7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 RBPMSQ93062 196 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 TMEM56Q96MV1 263 aa7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 GPN1Q9HCN4 374 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 PARP11Q9NR21 331 aa7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 TPSG1Q9NRR2 321 aa7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 WNK2Q9Y3S1 2297 aa7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 SONP18583 2426 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-208ENST00000572351 C9orf170A2RU37 121 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 FCN1O00602 326 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 IGKV1-39P01597 117 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 IGKV1D-39P04432 117 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 CRYGBP07316 175 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 SPNP16150 400 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 RIPPLY3P57055 190 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 RPL8P62917 257 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 FXYD3Q14802 87 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 TNXAQ16473 311 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 POU2AF1Q16633 256 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 PRSS8Q16651 343 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 SELENOHQ8IZQ5 122 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 PUSL1Q8N0Z8 303 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 SLC35G3Q8N808 338 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 UXS1Q8NBZ7 420 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 GRPEL2Q8TAA5 225 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 TMEM167AQ8TBQ9 72 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 TMEM158Q8WZ71 300 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 ARPC1AQ92747 370 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 IL22RA2Q969J5 263 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 PHB2Q99623 299 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 HSPB9Q9BQS6 159 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 COMMD5Q9GZQ3 224 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 ALX4Q9H161 411 aaPredicted RBP7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 ZNF430Q9H8G1 570 aaPredicted RBP7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 ZNF702PQ9H963 129 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 BET1LQ9NYM9 111 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 MMP24Q9Y5R2 645 aa7.49□□□□□ -1.21
NPLOC4-208ENST00000572351 NAV3Q8IVL0 2385 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 A0A0B4J2A0 478 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 AP4M1O00189 453 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 UPK2O00526 184 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 PRAF2O60831 178 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 TSPAN9O75954 239 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 NDUFA7O95182 113 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 DUS4LO95620 317 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 IGKV1-5P01602 117 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 OPN1MWP04001 364 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 OPN1MW2P0DN77 364 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 OPN1MW3P0DN78 364 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 HKR1P10072 659 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 HLA-GP17693 338 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 VDAC1P21796 283 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 MECP2P51608 486 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 OR2B8PP59922 312 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 CX3CL1P78423 397 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 RELBQ01201 579 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 PJVKQ0ZLH3 352 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 FOXL1Q12952 345 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 ECSCRQ19T08 205 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 TMEM95Q3KNT9 176 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 ANKRD55Q3KP44 614 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 KRTAP24-1Q3LI83 254 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 THOC7Q6I9Y2 204 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 ZNF562Q6V9R5 426 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 Q6ZS46 218 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 LYZL2Q7Z4W2 148 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 FAM219AQ8IW50 185 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 OR52B4Q8NGK2 314 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 LHFPL5Q8TAF8 219 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 ZNF431Q8TF32 576 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 SEC22AQ96IW7 307 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 SEC22CQ9BRL7 303 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 MARVELD1Q9BSK0 173 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 PDCD10Q9BUL8 212 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 C19orf24Q9BVV8 132 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 OR51J1Q9H342 316 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 SHPKQ9UHJ6 478 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 PRNDQ9UKY0 176 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 NSG2Q9Y328 171 aa7.48□□□□□ -1.21
NPLOC4-208ENST00000572351 IGHV7-81A0A0B4J1V7 117 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 TRAV3A0A0B4J244 114 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 DUXBA0A1W2PPF3 345 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 CLPSL1A2RUU4 121 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 IFNA21P01568 189 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 IGHG2P01859 326 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 IL5P05113 134 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 HOXB5P09067 269 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 OR9G9P0C7N8 305 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 MDKP21741 143 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 MAS1LP35410 378 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 SLC35B1P78383 322 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 Q8N2B8 174 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 C12orf45Q8N5I9 185 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 MITD1Q8WV92 249 aa7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 SRSF12Q8WXF0 261 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 LSM10Q969L4 123 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 FYTTD1Q96QD9 318 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-208ENST00000572351 SPIN2AQ99865 258 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms