RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ABHD5Q8WTS1 349 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 C15orf40Q8WUR7 153 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 ARPC1AQ92747 370 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 TMEM230Q96A57 120 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 RHOVQ96L33 236 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 TP53RKQ96S44 253 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 C5orf66Q9H5L9 145 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 HRASLSQ9HDD0 168 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 VSIG4Q9Y279 399 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 PRELID3BQ9Y3B1 194 aa5.44□□□□□ -1.54
SMG6-209ENST00000571442 A0A0G2JRQ6 117 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 MSGN1A6NI15 193 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 TEX22C9J3V5 150 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 M0QZ24 198 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 UPK2O00526 184 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 MPPED1O15442 326 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 RBFOX2O43251 390 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMG6-209ENST00000571442 OR2A4O95047 310 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 HPRT1P00492 218 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 PRH1P02810 166 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 IFNA6P05013 189 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 ELANEP08246 267 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 PGAM2P15259 253 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 F2RP25116 425 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 G6PCP35575 357 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 KIR2DS2P43631 304 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 PIGPP57054 158 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 RND3P61587 244 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 DEFA6Q01524 100 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 CATR1Q13166 79 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 CBX3Q13185 183 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 FOXE3Q13461 319 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 IZUMO4Q1ZYL8 232 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 C2orf68Q2NKX9 166 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 SP6Q3SY56 376 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 PDLIM3Q53GG5 364 aaPredicted RBP5.43□□□□□ -1.54
SMG6-209ENST00000571442 TEX38Q6PEX7 206 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 ADAD2Q8NCV1 583 aaKnown RBP5.43□□□□□ -1.54
SMG6-209ENST00000571442 OR5T1Q8NG75 326 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 LHFPL5Q8TAF8 219 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 TMEM167AQ8TBQ9 72 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 SRSF12Q8WXF0 261 aaKnown RBP5.43□□□□□ -1.54
SMG6-209ENST00000571442 R3HDM4Q96D70 268 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 MS4A10Q96PG2 267 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 OR5B12Q96R08 314 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 OR2A7Q96R45 310 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 ALX4Q9H161 411 aaPredicted RBP5.43□□□□□ -1.54
SMG6-209ENST00000571442 PLEKHA2Q9HB19 425 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 AKIP1Q9NQ31 210 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 TMEM140Q9NV12 185 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 SLC2A8Q9NY64 477 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 BET1LQ9NYM9 111 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 PRR13Q9NZ81 148 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 RABL2AQ9UBK7 228 aaPredicted RBP5.43□□□□□ -1.54
SMG6-209ENST00000571442 RABL2BQ9UNT1 228 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 GPR132Q9UNW8 380 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 NSG2Q9Y328 171 aa5.43□□□□□ -1.54
SMG6-209ENST00000571442 TSSC4Q9Y5U2 329 aaPredicted RBP5.43□□□□□ -1.54
SMG6-209ENST00000571442 DISC1C4P0D8 188 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 CNIH1O95406 144 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 KRASP01116 189 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 IGKV1-5P01602 117 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 CTSDP07339 412 aaPredicted RBP5.42□□□□□ -1.54
SMG6-209ENST00000571442 PF4V1P10720 104 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 AREGP15514 252 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 PTBP1P26599 531 aaKnown RBP eCLIP5.42□□□□□ -1.544e-7■■■■□ 26.4
SMG6-209ENST00000571442 BTCP35070 178 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 RAB9AP51151 201 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 TAS2R31P59538 309 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 SLC35B1P78383 322 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 ZNF45Q02386 682 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 MEF2DQ14814 521 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 AKIRIN2Q53H80 203 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 CXorf66Q5JRM2 361 aaPredicted RBP5.42□□□□□ -1.54
SMG6-209ENST00000571442 COMMD1Q8N668 190 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 ZNF491Q8N8L2 437 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 KLHL30-AS1Q8NEE0 82 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 RAX2Q96IS3 184 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 SEC22AQ96IW7 307 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 MCUBQ9NWR8 336 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 COMMD9Q9P000 198 aa5.42□□□□□ -1.54
SMG6-209ENST00000571442 FOXA2Q9Y261 457 aaPredicted RBP5.42□□□□□ -1.54
SMG6-209ENST00000571442 LINC00854A0A1B0GVQ3 168 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 MARCH11A6NNE9 402 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 G3V4G9 280 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 H0Y980 276 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 I3L521 148 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 PLA2G10O15496 165 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 HRASP01112 189 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 IGHV3-11P01762 117 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 REG1AP05451 166 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 OR5AC1P0C628 307 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 P0C879 139 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 IL7P13232 177 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 NQO2P16083 231 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 HLA-GP17693 338 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 RPL27AP46776 148 aaKnown RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 CDX1P47902 265 aaPredicted RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 CCR6P51684 374 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 OR2B8PP59922 312 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms