RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NEDD4LQ96PU5 975 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 GPHA2Q96T91 129 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 SRXN1Q9BYN0 137 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 SH3BGRL3Q9H299 93 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 FBXL15Q9H469 300 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 GPR84Q9NQS5 396 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 MMP26Q9NRE1 261 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 LYRM2Q9NU23 88 aaPredicted RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 NUFIP1Q9UHK0 495 aaKnown RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 ERG28Q9UKR5 140 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 KLF12Q9Y4X4 402 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 V9GYS6 101 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 DSCAML1Q8TD84 2053 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 KIAA2026Q5HYC2 2103 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 SHANK1Q9Y566 2161 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 IGLV1-36A0A0B4J1U3 117 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 TRAV39A0A0B4J263 110 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 A0A1B0GV50 99 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 A0A1W2PP11 408 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR5H15A6NDH6 313 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 HMSDA8MTL9 139 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 SNRPGP15A8MWD9 76 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 C1orf196B1AJZ1 125 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 J3KT08 172 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 DNASE2O00115 360 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 ETV2O00321 342 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 MRPS12O15235 138 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 PIN1P1O15428 100 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 PPIHO43447 177 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 BUB3O43684 328 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 TRAF3IP2O43734 574 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 MMP23AO75900 390 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 NEURL1O76050 574 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 WISP2O76076 250 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 PLAUP00749 431 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 HBZP02008 142 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 IL5P05113 134 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 IL6RP08887 468 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR5G3P0C626 314 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 SMIM17P0DL12 118 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 PSG2P11465 335 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 RPL35AP18077 110 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 CDK2P24941 298 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 NPY1RP25929 384 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 FAUP35544 74 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 GABRA2P47869 451 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 SLC25A1P53007 311 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 RPS11P62280 158 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMG6-208ENST00000570874 RPL18AQ02543 176 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 SSBP1Q04837 148 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 SMAGPQ0VAQ4 97 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 EIF3IQ13347 325 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 LY6DQ14210 128 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 LAGE3Q14657 143 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 SLC10A1Q14973 349 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 PHLDA2Q53GA4 152 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 COL5A1-AS1Q5SY13 56 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 ZNF684Q5T5D7 378 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 ZNF57Q68EA5 555 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 SLC18B1Q6NT16 456 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 Q6ZTK2 550 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 C5orf24Q7Z6I8 188 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 CDC20BQ86Y33 519 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 TOMM5Q8N4H5 51 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 TCTEX1D1Q8N7M0 179 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR4F17Q8NGA8 305 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR51A2Q8NGJ7 313 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR10G7Q8NGN6 311 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR1J4Q8NGS1 313 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR10AC1Q8NH08 325 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR4F5Q8NH21 305 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 MFSD8Q8NHS3 518 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 C8orf46Q8TAG6 207 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 MBD3L1Q8WWY6 194 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 RASL10AQ92737 203 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 RBPMSQ93062 196 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 PTX4Q96A99 478 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 PGLYRP3Q96LB9 341 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR4F4Q96R69 305 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 TP53RKQ96S44 253 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 TMEM70Q9BUB7 260 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 SNHG12Q9BXW3 62 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 ZNF436Q9C0F3 470 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 MEGF9Q9H1U4 602 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 RBKSQ9H477 322 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 METTL17Q9H7H0 456 aaPredicted RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 TAF9BQ9HBM6 251 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 NRN1Q9NPD7 142 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 MRPL16Q9NX20 251 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 TAS2R8Q9NYW2 309 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 THYN1Q9P016 225 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 COMMD3Q9UBI1 195 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 NAT8BQ9UHF3 227 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 PRNDQ9UKY0 176 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 OR51B2Q9Y5P1 312 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 DIDO1Q9BTC0 2240 aaKnown RBP2.93□□□□□ -1.94
SMG6-208ENST00000570874 HCFC1P51610 2035 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 FAM186AA6NE01 2351 aa2.93□□□□□ -1.94
SMG6-208ENST00000570874 DMXL1Q9Y485 3027 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 TRBV5-7A0A0A0MS05 114 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms