RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 EHFQ9NZC4 300 aa4.14□□□□□ -1.75
CHD3-212ENST00000570758 COMMD3Q9UBI1 195 aa4.14□□□□□ -1.75
CHD3-212ENST00000570758 MRPS7Q9Y2R9 242 aaKnown RBP4.14□□□□□ -1.75
CHD3-212ENST00000570758 FAM223BA6NKX1 122 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 BMPR1BO00238 502 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 CREBL2O60519 120 aaPredicted RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 PGLYRP1O75594 196 aaPredicted RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 OR2J3O76001 311 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 ACTL6BO94805 426 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 S1PR2O95136 353 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 NDUFB8O95169 186 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 HRASP01112 189 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 CSN3P07498 182 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 ZNF735P0CB33 412 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 GP9P14770 177 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 AREGP15514 252 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 RPA2P15927 270 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 HLA-GP17693 338 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 ZP3P21754 424 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 PRSS3P35030 304 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 RFX2P48378 723 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 SYNJ2BPP57105 145 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 HERV-K104P61576 105 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 RHOGP84095 191 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 DCTN2Q13561 401 aaKnown RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 EXOSC2Q13868 293 aaKnown RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 CTF1Q16619 201 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 GPR107Q5VW38 600 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 OR4A47Q6IF82 309 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 DHRS11Q6UWP2 260 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 TMEM17Q86X19 198 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 ANKRD13BQ86YJ7 626 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 SNX29P2Q8IUI4 249 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 LYSMD2Q8IV50 215 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 FAM223AQ8IWN6 122 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 OR9G4Q8NGQ1 327 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 OR6Q1Q8NGQ2 317 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 OR5H2Q8NGV7 314 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 OR51H1Q8NH63 302 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 GPX8Q8TED1 209 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 MOB3AQ96BX8 217 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 USMG5Q96IX5 58 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 FANCD2OSQ96PS1 177 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 FYTTD1Q96QD9 318 aaKnown RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 SPIN2AQ99865 258 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 SPIN2BQ9BPZ2 258 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 ZNF2Q9BSG1 426 aaPredicted RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 RSRP1Q9BUV0 290 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 RANGRFQ9HD47 186 aaPredicted RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 SLC2A9Q9NRM0 540 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 PEF1Q9UBV8 284 aaKnown RBP4.13□□□□□ -1.75
CHD3-212ENST00000570758 DMRT1Q9Y5R6 373 aa4.13□□□□□ -1.75
CHD3-212ENST00000570758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.12□□□□□ -1.75
CHD3-212ENST00000570758 NPIPB5A8MRT5 1133 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 UPK2O00526 184 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 RBFOX2O43251 390 aaKnown RBP eCLIP4.12□□□□□ -1.75
CHD3-212ENST00000570758 GABARAPO95166 117 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 IGLV1-51P01701 117 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 IGHV3-23P01764 117 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 APOA1P02647 267 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 REG1AP05451 166 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 CRYGCP07315 174 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 NHLRC4P0CG21 123 aaPredicted RBP4.12□□□□□ -1.75
CHD3-212ENST00000570758 CTRB1P17538 263 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 ELK1P19419 428 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 EDN2P20800 178 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 HLA-DMAP28067 261 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 PSMB6P28072 239 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 HRH1P35367 487 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 MAS1LP35410 378 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 ALDH3B2P48448 385 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 RORCP51449 518 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 TAS2R31P59538 309 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 TAS2R46P59540 309 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 OR2B8PP59922 312 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 RPL8P62917 257 aaKnown RBP4.12□□□□□ -1.75
CHD3-212ENST00000570758 ATP5G2Q06055 141 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 CATR1Q13166 79 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 POU2AF1Q16633 256 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 RPEL1Q2QD12 228 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 KLK9Q2XQG4 91 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 C15orf32Q32M92 178 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 ZNF585BQ52M93 769 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 RNASE12Q5GAN4 147 aaKnown RBP4.12□□□□□ -1.75
CHD3-212ENST00000570758 AADACL3Q5VUY0 350 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 CTRB2Q6GPI1 263 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 ADAMTSL5Q6ZMM2 481 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 SLC25A42Q86VD7 318 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 SBSPONQ8IVN8 264 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 NECAP1Q8NC96 275 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 OR4A5Q8NH83 315 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 VSTM2AQ8TAG5 236 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 CMTM3Q96MX0 182 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 OR4C12Q96R67 309 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 ELOVL1Q9BW60 279 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 HRASLSQ9HDD0 168 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 BET1LQ9NYM9 111 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 FBXL7Q9UJT9 491 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 KLK9Q9UKQ9 250 aa4.12□□□□□ -1.75
CHD3-212ENST00000570758 ZNF257Q9Y2Q1 563 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms