RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZNF562Q6V9R5 426 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 SELENOHQ8IZQ5 122 aaKnown RBP18.65■□□□□ 0.58
RAB40C-212ENST00000569575 Q8N2B8 174 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 CHPT1Q8WUD6 406 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 ZNF580Q9UK33 172 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 TMED3Q9Y3Q3 217 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 SNAPC5O75971 98 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 NDUFA7O95182 113 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 AMY1AP04745 511 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 AKR1C2P52895 323 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 DUX5Q96PT3 197 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 FBXL15Q9H469 300 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 TMEM140Q9NV12 185 aa18.64■□□□□ 0.57
RAB40C-212ENST00000569575 ACTL6BO94805 426 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 IGKV1-39P01597 117 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 IGKV1D-39P04432 117 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 CNTFRP26992 372 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 PRSS8Q16651 343 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 FBLN7Q53RD9 439 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 C16orf95Q9H693 158 aa18.63■□□□□ 0.57
RAB40C-212ENST00000569575 A0A1B0GUS0 222 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 UPK2O00526 184 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 IGHG2P01859 326 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 SLC25A6P12236 298 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 G6PCP35575 357 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 RPL8P62917 257 aaKnown RBP18.62■□□□□ 0.57
RAB40C-212ENST00000569575 RNASE11Q8TAA1 199 aaKnown RBP18.62■□□□□ 0.57
RAB40C-212ENST00000569575 CASTOR1Q8WTX7 329 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 COA4Q9NYJ1 87 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 PRNDQ9UKY0 176 aa18.62■□□□□ 0.57
RAB40C-212ENST00000569575 IFNA21P01568 189 aa18.61■□□□□ 0.57
RAB40C-212ENST00000569575 P0C879 139 aa18.61■□□□□ 0.57
RAB40C-212ENST00000569575 ANKRD55Q3KP44 614 aa18.61■□□□□ 0.57
RAB40C-212ENST00000569575 THOC7Q6I9Y2 204 aaKnown RBP18.61■□□□□ 0.57
RAB40C-212ENST00000569575 SLC35G3Q8N808 338 aa18.61■□□□□ 0.57
RAB40C-212ENST00000569575 TMEM68Q96MH6 324 aa18.61■□□□□ 0.57
RAB40C-212ENST00000569575 GON7Q9BXV9 100 aa18.61■□□□□ 0.57
RAB40C-212ENST00000569575 SSX9Q7RTT3 188 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 ZNF429Q86V71 674 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 FOXRED2Q8IWF2 684 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 VKORC1L1Q8N0U8 176 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 C12orf45Q8N5I9 185 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-212ENST00000569575 OR4F5Q8NH21 305 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 OR2T6Q8NHC8 308 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 LHFPL5Q8TAF8 219 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 SPIN2AQ99865 258 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 SPIN2BQ9BPZ2 258 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 ZNF257Q9Y2Q1 563 aa18.6■□□□□ 0.57
RAB40C-212ENST00000569575 NIPBLQ6KC79 2804 aaeCLIP18.59■□□□□ 0.57
RAB40C-212ENST00000569575 A0A1B0GU03 582 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 C7orf66A4D0T2 115 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 IGKV1-5P01602 117 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 SPNP16150 400 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 BLCAPP62952 87 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 OR5B3Q8NH48 314 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 OR4A16Q8NH70 328 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 SRSF8Q9BRL6 282 aaKnown RBP18.59■□□□□ 0.57
RAB40C-212ENST00000569575 COMMD5Q9GZQ3 224 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 OR51J1Q9H342 316 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 ZNF430Q9H8G1 570 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-212ENST00000569575 BEX1Q9HBH7 125 aa18.59■□□□□ 0.57
RAB40C-212ENST00000569575 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-212ENST00000569575 DBX1A6NMT0 343 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 AP4M1O00189 453 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 IGF1P05019 195 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 HKR1P10072 659 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 HLA-GP17693 338 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 CX3CL1P78423 397 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 TMEM267Q0VDI3 215 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-212ENST00000569575 TATDN3Q17R31 274 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 AARDQ4LEZ3 155 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 NMSQ5H8A3 153 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 HSD17B13Q7Z5P4 300 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-212ENST00000569575 SLC35E3Q7Z769 313 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 JMJD1CQ15652 2540 aa18.58■□□□□ 0.56
RAB40C-212ENST00000569575 IGHV7-81A0A0B4J1V7 117 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 C15orf61A6NNL5 157 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 CNIH1O95406 144 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 CA2P00918 260 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 COMPP49747 757 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-212ENST00000569575 CRIP2P52943 208 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-212ENST00000569575 RELBQ01201 579 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 Q6ZSV7 163 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 LYZL2Q7Z4W2 148 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 MRPL41Q8IXM3 137 aaKnown RBP18.57■□□□□ 0.56
RAB40C-212ENST00000569575 SEC22CQ9BRL7 303 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 ZNF702PQ9H963 129 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 TMEM14BQ9NUH8 114 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 FOXA2Q9Y261 457 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-212ENST00000569575 TNCP24821 2201 aa18.57■□□□□ 0.56
RAB40C-212ENST00000569575 SULT1A3P0DMM9 295 aa18.56■□□□□ 0.56
RAB40C-212ENST00000569575 SULT1A4P0DMN0 295 aa18.56■□□□□ 0.56
RAB40C-212ENST00000569575 FXYD3Q14802 87 aa18.56■□□□□ 0.56
RAB40C-212ENST00000569575 MRGPRG-AS1Q2M3A8 158 aa18.56■□□□□ 0.56
RAB40C-212ENST00000569575 OR52B4Q8NGK2 314 aa18.56■□□□□ 0.56
RAB40C-212ENST00000569575 OR52E5Q8NH55 327 aa18.56■□□□□ 0.56
RAB40C-212ENST00000569575 FCN1O00602 326 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 RIPPLY3P57055 190 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 FOXL1Q12952 345 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 SMCO1Q147U7 214 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms