RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RBFOX2O43251 390 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDT1-203ENST00000569140 EGR2P11161 476 aaPredicted RBP10.02□□□□□ -0.81
CDT1-203ENST00000569140 NQO2P16083 231 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 F2RP25116 425 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 FAUP35544 74 aaKnown RBP10.02□□□□□ -0.81
CDT1-203ENST00000569140 PIGPP57054 158 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 TPPP2P59282 170 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 AP3S2P59780 193 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 ZNF79Q15937 498 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 ZNF57Q68EA5 555 aaPredicted RBP10.02□□□□□ -0.81
CDT1-203ENST00000569140 OR4A47Q6IF82 309 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 LHFPL1Q86WI0 220 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 ZNF695Q8IW36 515 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 CCDC71LQ8N9Z2 235 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 OR51S1Q8NGJ8 323 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 OR5M8Q8NGP6 311 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 OR13C8Q8NGS7 320 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 TERB2Q8NHR7 220 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 SRSF12Q8WXF0 261 aaKnown RBP10.02□□□□□ -0.81
CDT1-203ENST00000569140 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 FYTTD1Q96QD9 318 aaKnown RBP10.02□□□□□ -0.81
CDT1-203ENST00000569140 PRRT1Q99946 306 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 SOSTQ9BQB4 213 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 KLK15Q9H2R5 256 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 TMEM140Q9NV12 185 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 COMMD9Q9P000 198 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 ZNF580Q9UK33 172 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 NUBP2Q9Y5Y2 271 aa10.02□□□□□ -0.81
CDT1-203ENST00000569140 KRASP01116 189 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 TRGV3P03979 118 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 SERPINE2P07093 398 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 ZNF735P0CB33 412 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 CD33P20138 364 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 PSMB8P28062 276 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
CDT1-203ENST00000569140 G6PCP35575 357 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 ECI1P42126 302 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 CRIP2P52943 208 aaPredicted RBP10.01□□□□□ -0.81
CDT1-203ENST00000569140 SSBP2P81877 361 aaPredicted RBP10.01□□□□□ -0.81
CDT1-203ENST00000569140 DEFB136Q30KP8 78 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 AKIRIN2Q53H80 203 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 TRIQKQ629K1 86 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
CDT1-203ENST00000569140 MINDY2Q8NBR6 621 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 OR4A5Q8NH83 315 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 TMEM167AQ8TBQ9 72 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 ZNF486Q96H40 463 aaPredicted RBP10.01□□□□□ -0.81
CDT1-203ENST00000569140 SCP2D1Q9UJQ7 156 aa10.01□□□□□ -0.81
CDT1-203ENST00000569140 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
CDT1-203ENST00000569140 MARCH11A6NNE9 402 aa10□□□□□ -0.81
CDT1-203ENST00000569140 SOX15O60248 233 aa10□□□□□ -0.81
CDT1-203ENST00000569140 IGLV1-40P01703 118 aa10□□□□□ -0.81
CDT1-203ENST00000569140 MYOD1P15172 320 aa10□□□□□ -0.81
CDT1-203ENST00000569140 HLA-GP17693 338 aa10□□□□□ -0.81
CDT1-203ENST00000569140 PTBP1P26599 531 aaKnown RBP eCLIP10□□□□□ -0.81
CDT1-203ENST00000569140 RPL27AP46776 148 aaKnown RBP10□□□□□ -0.81
CDT1-203ENST00000569140 RAB9AP51151 201 aa10□□□□□ -0.81
CDT1-203ENST00000569140 RPL8P62917 257 aaKnown RBP10□□□□□ -0.81
CDT1-203ENST00000569140 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
CDT1-203ENST00000569140 TRIM16LQ309B1 348 aa10□□□□□ -0.81
CDT1-203ENST00000569140 SPIN2AQ99865 258 aa10□□□□□ -0.81
CDT1-203ENST00000569140 SPIN2BQ9BPZ2 258 aa10□□□□□ -0.81
CDT1-203ENST00000569140 SRRQ9GZT4 340 aa10□□□□□ -0.81
CDT1-203ENST00000569140 BET1LQ9NYM9 111 aa10□□□□□ -0.81
CDT1-203ENST00000569140 VSIG4Q9Y279 399 aa10□□□□□ -0.81
CDT1-203ENST00000569140 LINC00854A0A1B0GVQ3 168 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 HMX3A6NHT5 357 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 CTSDP07339 412 aaPredicted RBP9.99□□□□□ -0.81
CDT1-203ENST00000569140 MAS1LP35410 378 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 CDX1P47902 265 aaPredicted RBP9.99□□□□□ -0.81
CDT1-203ENST00000569140 RND3P61587 244 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 DEFA5Q01523 94 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 C19orf54Q5BKX5 351 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 RNASE11Q8TAA1 199 aaKnown RBP9.99□□□□□ -0.81
CDT1-203ENST00000569140 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 TRIM63Q969Q1 353 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 TMEM68Q96MH6 324 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 COMMD5Q9GZQ3 224 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 GNB4Q9HAV0 340 aa9.99□□□□□ -0.81
CDT1-203ENST00000569140 TRAV3A0A0B4J244 114 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 C3orf85A0A1B0GTC6 90 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 C13orf42A0A1B0GVH6 325 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 H0Y980 276 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 UPK2O00526 184 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 RBMXL2O75526 392 aaKnown RBP9.98□□□□□ -0.81
CDT1-203ENST00000569140 SNAPC5O75971 98 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 OR9G9P0C7N8 305 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 ETV6P41212 452 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 AKR1C2P52895 323 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 OR2B8PP59922 312 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 KLF9Q13886 244 aaPredicted RBP9.98□□□□□ -0.81
CDT1-203ENST00000569140 SP6Q3SY56 376 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 H2BFWTQ7Z2G1 175 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
CDT1-203ENST00000569140 ZNF491Q8N8L2 437 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms