RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PTHLHP12272 177 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 DUTP33316 252 aaKnown RBP11.18□□□□□ -0.62
CMTM3-215ENST00000568477 FAUP35544 74 aaKnown RBP11.18□□□□□ -0.62
CMTM3-215ENST00000568477 ECI1P42126 302 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 INSL3P51460 131 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 CD69Q07108 199 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 DCUN1D4Q92564 292 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 MS4A10Q96PG2 267 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 NEURL2Q9BR09 285 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
CMTM3-215ENST00000568477 SLA2Q9H6Q3 261 aa11.18□□□□□ -0.62
CMTM3-215ENST00000568477 OVOL1O14753 267 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 TRGV3P03979 118 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 CRYGBP07316 175 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 PJVKQ0ZLH3 352 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 VMA21Q3ZAQ7 101 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 ZNF645Q8N7E2 425 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 TMEM229BQ8NBD8 167 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 DDB2Q92466 427 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 OR2W1Q9Y3N9 320 aa11.17□□□□□ -0.62
CMTM3-215ENST00000568477 SORL1Q92673 2214 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 LINC00473A8K010 186 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 INMT-MINDY4F8WBC2 141 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 H3BUA1 57 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 SSX5O60225 188 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 SLC22A5O76082 557 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 CRYZL1O95825 349 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 TCRBP04435 133 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 TRAPPC2P0DI81 140 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 TRAPPC2BP0DI82 140 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
CMTM3-215ENST00000568477 HLA-DMAP28067 261 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 RCVRNP35243 200 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 SLURP1P55000 103 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 TAS2R19P59542 299 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
CMTM3-215ENST00000568477 OR5T1Q8NG75 326 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 RHOVQ96L33 236 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 PRR25Q96S07 402 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 ANXA10Q9UJ72 324 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 TNCP24821 2201 aa11.16□□□□□ -0.62
CMTM3-215ENST00000568477 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 A0A087WW49 117 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
CMTM3-215ENST00000568477 DHFRP00374 187 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 HSPB1P04792 205 aaKnown RBP11.15□□□□□ -0.62
CMTM3-215ENST00000568477 AKAIN1P0CW23 69 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 UBE2KP61086 200 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 ZNF429Q86V71 674 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 TEX45Q8NA69 505 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-215ENST00000568477 DLX4Q92988 240 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-215ENST00000568477 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-215ENST00000568477 PRELID3BQ9Y3B1 194 aa11.15□□□□□ -0.62
CMTM3-215ENST00000568477 C13orf42A0A1B0GVH6 325 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 HMX3A6NHT5 357 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 SAP30O75446 220 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 LY86O95711 162 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 HNRNPCP07910 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
CMTM3-215ENST00000568477 CBX5P45973 191 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 ARPC4P59998 168 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 PRSS8Q16651 343 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 VAX1Q5SQQ9 334 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 C11orf87Q6NUJ2 197 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 STEAP1BQ6NZ63 245 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 KCTD9Q7L273 389 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
CMTM3-215ENST00000568477 IGKV1D-13A0A0B4J2D9 117 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 CREBL2O60519 120 aaPredicted RBP11.13□□□□□ -0.63
CMTM3-215ENST00000568477 FCGR3BO75015 233 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 TUSC2O75896 110 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 CD74P04233 296 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 H2AFB2P0C5Z0 115 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 IGKV1-13P0DP09 117 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 TBPP20226 339 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 CCR6P51684 374 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 MEF2DQ14814 521 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 TNXAQ16473 311 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 IDO2Q6ZQW0 420 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 AKAP14Q86UN6 197 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 BEST4Q8NFU0 473 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 OR4C16Q8NGL9 310 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 PHB2Q99623 299 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
CMTM3-215ENST00000568477 NUDT15Q9NV35 164 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 COA4Q9NYJ1 87 aa11.13□□□□□ -0.63
CMTM3-215ENST00000568477 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
CMTM3-215ENST00000568477 COL7A1Q02388 2944 aa11.12□□□□□ -0.63
CMTM3-215ENST00000568477 A0A0B4J293 547 aa11.12□□□□□ -0.63
CMTM3-215ENST00000568477 MPPED1O15442 326 aa11.12□□□□□ -0.63
CMTM3-215ENST00000568477 ACTL6BO94805 426 aa11.12□□□□□ -0.63
CMTM3-215ENST00000568477 NDUFB6O95139 128 aa11.12□□□□□ -0.63
CMTM3-215ENST00000568477 BRI3O95415 125 aa11.12□□□□□ -0.63
CMTM3-215ENST00000568477 RAB3DO95716 219 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms