RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 NPIPB5A8MRT5 1133 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 A8MWP6 167 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
PALB2-205ENST00000567003 SPHARQ15513 63 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 FAM106AQ4KMX7 169 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 FAM209BQ5JX69 171 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 SLC25A42Q86VD7 318 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 WFDC3Q8IUB2 231 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 UFD1Q92890 307 aa11.5□□□□□ -0.57
PALB2-205ENST00000567003 ELF5Q9UKW6 265 aaPredicted RBP11.5□□□□□ -0.57
PALB2-205ENST00000567003 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
PALB2-205ENST00000567003 PTGES3LE9PB15 166 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 RAB27BO00194 218 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 MFNGO00587 321 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 CREBL2O60519 120 aaPredicted RBP11.49□□□□□ -0.57
PALB2-205ENST00000567003 BMI1P35226 326 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 ZNF585BQ52M93 769 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 KCTD9Q7L273 389 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 PACRGLQ8N7B6 248 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 OR51E2Q9H255 320 aa11.49□□□□□ -0.57
PALB2-205ENST00000567003 KBTBD11O94819 623 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 S1PR2O95136 353 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 ZNF735P0CB33 412 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 RPL35AP18077 110 aaKnown RBP11.48□□□□□ -0.57
PALB2-205ENST00000567003 CALRP27797 417 aaKnown RBP11.48□□□□□ -0.57
PALB2-205ENST00000567003 ANKRD55Q3KP44 614 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 RBPMS2Q6ZRY4 209 aaKnown RBP11.48□□□□□ -0.57
PALB2-205ENST00000567003 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 OR10R2Q8NGX6 335 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 SLC2A9Q9NRM0 540 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 RAB22AQ9UL26 194 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 TP53TG1Q9Y2A0 90 aa11.48□□□□□ -0.57
PALB2-205ENST00000567003 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 DIRAS3O95661 229 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 HIST1H1DP16402 221 aaKnown RBP11.47□□□□□ -0.57
PALB2-205ENST00000567003 NFYAP23511 347 aaPredicted RBP11.47□□□□□ -0.57
PALB2-205ENST00000567003 CRHBPP24387 322 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 PSMB6P28072 239 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 GPR183P32249 361 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 APOC4P55056 127 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 OR4A47Q6IF82 309 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 Q6ZWC4 215 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 SSX9Q7RTT3 188 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 PUSL1Q8N0Z8 303 aaKnown RBP11.47□□□□□ -0.57
PALB2-205ENST00000567003 PHLDA1Q8WV24 401 aaPredicted RBP11.47□□□□□ -0.57
PALB2-205ENST00000567003 OR2A7Q96R45 310 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 GPHA2Q96T91 129 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 RBMX2Q9Y388 322 aaKnown RBP11.47□□□□□ -0.57
PALB2-205ENST00000567003 V9GY05 133 aa11.47□□□□□ -0.57
PALB2-205ENST00000567003 CGB1A6NKQ9 187 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 J3QL48 77 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 CLEC3BP05452 202 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 CRYGCP07315 174 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 C8orf88P0DMB2 117 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 CTRB1P17538 263 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 OR10A3P58181 314 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 BRWD1-AS2P59051 145 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 FABP5Q01469 135 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 ARFRP1Q13795 201 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 IRF3Q14653 427 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 ODF3L2Q3SX64 289 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 CTRB2Q6GPI1 263 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 OR2C3Q8N628 320 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 TMEM167AQ8TBQ9 72 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 RNF183Q96D59 192 aa11.46□□□□□ -0.57
PALB2-205ENST00000567003 MRPS7Q9Y2R9 242 aaKnown RBP11.46□□□□□ -0.57
PALB2-205ENST00000567003 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 IGLV11-55A0A075B6I3 123 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 RPA2P15927 270 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 GADD45AP24522 165 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 FCGR2BP31994 310 aaPredicted RBP11.45□□□□□ -0.58
PALB2-205ENST00000567003 TALDO1P37837 337 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 PSMD7P51665 324 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 TCTEX1D2Q8WW35 142 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 SPATA2Q9UM82 520 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 PRELID3BQ9Y3B1 194 aa11.45□□□□□ -0.58
PALB2-205ENST00000567003 DEFA4P12838 97 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 CD36P16671 472 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 MAP2K4P45985 399 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 EIF4EBP1Q13541 118 aaPredicted RBP11.44□□□□□ -0.58
PALB2-205ENST00000567003 RCN1Q15293 331 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 SLC38A6Q8IZM9 456 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 STPG3Q8N7X2 389 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 OR4S2Q8NH73 311 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 TAS2R8Q9NYW2 309 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
PALB2-205ENST00000567003 OR2W1Q9Y3N9 320 aa11.44□□□□□ -0.58
PALB2-205ENST00000567003 IGHV3OR16-8A0A075B7F1 116 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 TRBV7-1A0A0A6YYK4 115 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 HLA-DQB1P01920 261 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms