RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ZNF833PQ6ZTB9 187 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 OR51H1Q8NH63 302 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 ABHD14BQ96IU4 210 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 TP53RKQ96S44 253 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 PDCD10Q9BUL8 212 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 WNT10AQ9GZT5 417 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 ZFP57Q9NU63 452 aa10.69□□□□□ -0.7
CLK3-218ENST00000566926 M0R1X1 148 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 SLC31A2O15432 143 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 FBXO24O75426 580 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 RRASP10301 218 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 VDAC1P21796 283 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 FAM53AQ6NSI3 398 aaPredicted RBP10.68□□□□□ -0.7
CLK3-218ENST00000566926 FAM219AQ8IW50 185 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 ODF3L1Q8IXM7 274 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 OR8H1Q8NGG4 311 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 TCTEX1D2Q8WW35 142 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 AIFM2Q9BRQ8 373 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 NMES1Q9C002 83 aa10.68□□□□□ -0.7
CLK3-218ENST00000566926 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
CLK3-218ENST00000566926 PKD1L1Q8TDX9 2849 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 TRRAPQ9Y4A5 3859 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 C5orf51A6NDU8 294 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 MOSP00540 346 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 SLC25A6P12236 298 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 H2BFSP57053 126 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 HNF4GQ14541 408 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 RTL8BQ17RB0 113 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 SP6Q3SY56 376 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 ZFP69Q49AA0 526 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 C9orf152Q5JTZ5 239 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 TMEM268Q5VZI3 342 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 CENPVQ7Z7K6 275 aaPredicted RBP10.67□□□□□ -0.7
CLK3-218ENST00000566926 OR4S2Q8NH73 311 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
CLK3-218ENST00000566926 EAF1Q96JC9 268 aaPredicted RBP10.67□□□□□ -0.7
CLK3-218ENST00000566926 ZNF251Q9BRH9 671 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 PLEKHA2Q9HB19 425 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 COMMD9Q9P000 198 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 CACFD1Q9UGQ2 172 aa10.67□□□□□ -0.7
CLK3-218ENST00000566926 IGHV3-72A0A0B4J1Y9 119 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 HPRT1P00492 218 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 APOA2P02652 100 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 C1QBP02746 253 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 AMY1AP04745 511 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 PET100P0DJ07 73 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 THOC7Q6I9Y2 204 aaKnown RBP10.66□□□□□ -0.7
CLK3-218ENST00000566926 Q6ZS46 218 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 SELENOHQ8IZQ5 122 aaKnown RBP10.66□□□□□ -0.7
CLK3-218ENST00000566926 SPAG16Q8N0X2 631 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 SLC35G3Q8N808 338 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 OR2T35Q8NGX2 323 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 RRNAD1Q96FB5 475 aaKnown RBP10.66□□□□□ -0.7
CLK3-218ENST00000566926 C5orf30Q96GV9 206 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 C2orf50Q96LR7 162 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 HYLS1Q96M11 299 aa10.66□□□□□ -0.7
CLK3-218ENST00000566926 NCBP2LA6PVI3 153 aaKnown RBP10.65□□□□□ -0.7
CLK3-218ENST00000566926 FAM25EA8MYX2 175 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 HOXB5P09067 269 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 MC5RP33032 325 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 RPL39P5Q59GN2 51 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 GGNBP1Q5YKI7 109 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 Q8N6K4 173 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 OR5AU1Q8NGC0 362 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 RNASE11Q8TAA1 199 aaKnown RBP10.65□□□□□ -0.7
CLK3-218ENST00000566926 DDB2Q92466 427 aa10.65□□□□□ -0.7
CLK3-218ENST00000566926 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.7
CLK3-218ENST00000566926 A0A1B0GU03 582 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 C13orf42A0A1B0GVH6 325 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 PROP1O75360 226 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 ADAP1O75689 374 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 OPN1MWP04001 364 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 OPN1MW2P0DN77 364 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 OPN1MW3P0DN78 364 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 AKR1C2P52895 323 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 ERVK-16P61578 105 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 RPL30P62888 115 aaKnown RBP10.64□□□□□ -0.71
CLK3-218ENST00000566926 IAH1Q2TAA2 248 aaPredicted RBP10.64□□□□□ -0.71
CLK3-218ENST00000566926 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 ZNF585BQ52M93 769 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 LYZL2Q7Z4W2 148 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 FOXRED2Q8IWF2 684 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 OR4X2Q8NGF9 303 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 OR5AN1Q8NGI8 311 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 LHFPL5Q8TAF8 219 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 WIPF2Q8TF74 440 aaPredicted RBP10.64□□□□□ -0.71
CLK3-218ENST00000566926 RASL11BQ9BPW5 248 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 COA4Q9NYJ1 87 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 PLXNB1O43157 2135 aa10.64□□□□□ -0.71
CLK3-218ENST00000566926 LINC00473A8K010 186 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 KCNAB3O43448 404 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 FCGR3BO75015 233 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 HRASP01112 189 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 IGHG2P01859 326 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 CT45A6P0DMU7 189 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 CT45A5P0DMU8 189 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms