RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PLXNB1O43157 2135 aa20.5■□□□□ 0.87
NME3-209ENST00000566600 ARPC1BO15143 372 aaKnown RBP20.49■□□□□ 0.87
NME3-209ENST00000566600 S1PR2O95136 353 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 EGR2P11161 476 aaPredicted RBP20.49■□□□□ 0.87
NME3-209ENST00000566600 LPAR6P43657 344 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 INPP1P49441 399 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 ERVK-16P61578 105 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 TNXAQ16473 311 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 KHDC1LQ5JSQ8 128 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 TRIQKQ629K1 86 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 SSX9Q7RTT3 188 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 RNF152Q8N8N0 203 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 MINDY2Q8NBR6 621 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 MRGPRFQ96AM1 343 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 TMEM68Q96MH6 324 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 FAM103A1Q9BTL3 118 aaKnown RBP20.49■□□□□ 0.87
NME3-209ENST00000566600 HRASLSQ9HDD0 168 aa20.49■□□□□ 0.87
NME3-209ENST00000566600 PI3P19957 117 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 MAS1LP35410 378 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 SSBP2P81877 361 aaPredicted RBP20.48■□□□□ 0.87
NME3-209ENST00000566600 MRGPRG-AS1Q2M3A8 158 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 C19orf54Q5BKX5 351 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 ZNF57Q68EA5 555 aaPredicted RBP20.48■□□□□ 0.87
NME3-209ENST00000566600 HIST2H2BDQ6DRA6 164 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 OR4A47Q6IF82 309 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 UNQ5815/PRO19632Q6UWF5 114 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 LFNGQ8NES3 379 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 DMBX1Q8NFW5 382 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 R3HDM4Q96D70 268 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 PTTG2Q9NZH5 202 aa20.48■□□□□ 0.87
NME3-209ENST00000566600 FOXA2Q9Y261 457 aaPredicted RBP20.48■□□□□ 0.87
NME3-209ENST00000566600 IGLV1-40P01703 118 aa20.47■□□□□ 0.87
NME3-209ENST00000566600 ZNF585BQ52M93 769 aa20.47■□□□□ 0.87
NME3-209ENST00000566600 TMEM65Q6PI78 240 aa20.47■□□□□ 0.87
NME3-209ENST00000566600 OR4F17Q8NGA8 305 aa20.47■□□□□ 0.87
NME3-209ENST00000566600 OR5M8Q8NGP6 311 aa20.47■□□□□ 0.87
NME3-209ENST00000566600 OR4F4Q96R69 305 aa20.47■□□□□ 0.87
NME3-209ENST00000566600 ADARB2-AS1A8MUL3 147 aa20.46■□□□□ 0.87
NME3-209ENST00000566600 B3GALNT1O75752 331 aa20.46■□□□□ 0.87
NME3-209ENST00000566600 PSMB8P28062 276 aa20.46■□□□□ 0.87
NME3-209ENST00000566600 CD40LGP29965 261 aa20.46■□□□□ 0.87
NME3-209ENST00000566600 RPL23AP62750 156 aaKnown RBP20.46■□□□□ 0.87
NME3-209ENST00000566600 CADM3Q8N126 398 aa20.46■□□□□ 0.87
NME3-209ENST00000566600 GPR132Q9UNW8 380 aa20.46■□□□□ 0.87
NME3-209ENST00000566600 A0A1W2PN81 502 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 A0A1W2PRX2 142 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 MARCH11A6NNE9 402 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 H0Y980 276 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 SERPINE2P07093 398 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 RPA2P15927 270 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 SLC6A1P30531 599 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 CHRNA7P36544 502 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 RPL8P62917 257 aaKnown RBP20.45■□□□□ 0.86
NME3-209ENST00000566600 BAK1Q16611 211 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 SRSF12Q8WXF0 261 aaKnown RBP20.45■□□□□ 0.86
NME3-209ENST00000566600 PHB2Q99623 299 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 SPIN2AQ99865 258 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 SPIN2BQ9BPZ2 258 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 TMEM140Q9NV12 185 aa20.45■□□□□ 0.86
NME3-209ENST00000566600 C3orf85A0A1B0GTC6 90 aa20.44■□□□□ 0.86
NME3-209ENST00000566600 RPLP1P05386 114 aaKnown RBP20.44■□□□□ 0.86
NME3-209ENST00000566600 FGF2P09038 288 aa20.44■□□□□ 0.86
NME3-209ENST00000566600 PF4V1P10720 104 aa20.44■□□□□ 0.86
NME3-209ENST00000566600 S100ZQ8WXG8 99 aa20.44■□□□□ 0.86
NME3-209ENST00000566600 RTBDNQ9BSG5 229 aaPredicted RBP20.44■□□□□ 0.86
NME3-209ENST00000566600 C5orf66Q9H5L9 145 aa20.44■□□□□ 0.86
NME3-209ENST00000566600 MSGN1A6NI15 193 aa20.43■□□□□ 0.86
NME3-209ENST00000566600 TSPAN15O95858 294 aa20.43■□□□□ 0.86
NME3-209ENST00000566600 KRASP01116 189 aa20.43■□□□□ 0.86
NME3-209ENST00000566600 IL6RP08887 468 aaPredicted RBP20.43■□□□□ 0.86
NME3-209ENST00000566600 SDHCQ99643 169 aaPredicted RBP20.43■□□□□ 0.86
NME3-209ENST00000566600 AKIP1Q9NQ31 210 aa20.43■□□□□ 0.86
NME3-209ENST00000566600 TNCP24821 2201 aa20.42■□□□□ 0.86
NME3-209ENST00000566600 TEX13DA0A0J9YY54 714 aaPredicted RBP20.42■□□□□ 0.86
NME3-209ENST00000566600 NAP1L6A6NFF2 107 aa20.42■□□□□ 0.86
NME3-209ENST00000566600 UPK2O00526 184 aa20.42■□□□□ 0.86
NME3-209ENST00000566600 HLA-GP17693 338 aa20.42■□□□□ 0.86
NME3-209ENST00000566600 TREML4Q6UXN2 200 aa20.42■□□□□ 0.86
NME3-209ENST00000566600 PKD1L1Q8TDX9 2849 aa20.42■□□□□ 0.86
NME3-209ENST00000566600 NUDT19A8MXV4 375 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 ATG12O94817 140 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 G6PCP35575 357 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 RPL27AP46776 148 aaKnown RBP20.41■□□□□ 0.86
NME3-209ENST00000566600 CDX1P47902 265 aaPredicted RBP20.41■□□□□ 0.86
NME3-209ENST00000566600 RAB9AP51151 201 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 ZNF695Q8IW36 515 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 TP53RKQ96S44 253 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 SLC25A21Q9BQT8 299 aaPredicted RBP20.41■□□□□ 0.86
NME3-209ENST00000566600 SLA2Q9H6Q3 261 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 VWFP04275 2813 aa20.41■□□□□ 0.86
NME3-209ENST00000566600 CENPXA8MT69 81 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 H3BUA1 57 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 SOX15O60248 233 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 IL7P13232 177 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 LCNL1Q6ZST4 164 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 FAM110DQ8TAY7 271 aaPredicted RBP20.4■□□□□ 0.86
NME3-209ENST00000566600 MYOZ3Q8TDC0 251 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 TSC22D3Q99576 134 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 COMMD5Q9GZQ3 224 aa20.4■□□□□ 0.86
NME3-209ENST00000566600 KLK15Q9H2R5 256 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms