RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FXYD4P59646 89 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 ZNF818PQ6ZRF7 136 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 SSX9Q7RTT3 188 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 OR6Q1Q8NGQ2 317 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 VCX3AQ9NNX9 186 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 DMRT1Q9Y5R6 373 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 CGB1A6NKQ9 187 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 BMPR1BO00238 502 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 SULT1C2O00338 296 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 CREBL2O60519 120 aaPredicted RBP11.17□□□□□ -0.62
FANCA-220ENST00000566409 ACTL6BO94805 426 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 EIF4EP06730 217 aaKnown RBP11.17□□□□□ -0.62
FANCA-220ENST00000566409 NAT1P18440 290 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 GNRHRP30968 328 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 TMEM69Q5SWH9 247 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 DHRS11Q6UWP2 260 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 SBSPONQ8IVN8 264 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 SPAG16Q8N0X2 631 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 Q8N1Y9 231 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 ZBTB34Q8NCN2 500 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 WWC2-AS2Q96NR7 200 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 U3KQK5 164 aa11.17□□□□□ -0.62
FANCA-220ENST00000566409 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 OR2J3O76001 311 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 HRASP01112 189 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 CSN3P07498 182 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 ZNF735P0CB33 412 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 AREGP15514 252 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 KIR2DS2P43631 304 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 RPL27AP46776 148 aaKnown RBP11.16□□□□□ -0.62
FANCA-220ENST00000566409 VBP1P61758 197 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 ATP5G2Q06055 141 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 EXOSC2Q13868 293 aaKnown RBP11.16□□□□□ -0.62
FANCA-220ENST00000566409 OR4A47Q6IF82 309 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 TMEM17Q86X19 198 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 LYSMD2Q8IV50 215 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 FYTTD1Q96QD9 318 aaKnown RBP11.16□□□□□ -0.62
FANCA-220ENST00000566409 RSRP1Q9BUV0 290 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 SLC2A9Q9NRM0 540 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 EHFQ9NZC4 300 aa11.16□□□□□ -0.62
FANCA-220ENST00000566409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
FANCA-220ENST00000566409 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 RBFOX2O43251 390 aaKnown RBP eCLIP11.15□□□□□ -0.62
FANCA-220ENST00000566409 PMP2P02689 132 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 CRYGCP07315 174 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 FRMD6-AS1P0C7T7 363 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 MAS1LP35410 378 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 RPL8P62917 257 aaKnown RBP11.15□□□□□ -0.62
FANCA-220ENST00000566409 C15orf32Q32M92 178 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 ADAMTSL5Q6ZMM2 481 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 ANKRD13BQ86YJ7 626 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
FANCA-220ENST00000566409 NAA50Q9GZZ1 169 aaKnown RBP11.15□□□□□ -0.62
FANCA-220ENST00000566409 IFT46Q9NQC8 304 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 BET1LQ9NYM9 111 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 COMMD3Q9UBI1 195 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 ZNF257Q9Y2Q1 563 aa11.15□□□□□ -0.62
FANCA-220ENST00000566409 NDUFB8O95169 186 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 SMIM18P0DKX4 95 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 HLA-GP17693 338 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 PRSS3P35030 304 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
FANCA-220ENST00000566409 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 RPEL1Q2QD12 228 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 OR51H1Q8NH63 302 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 MOB3AQ96BX8 217 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
FANCA-220ENST00000566409 THAP7Q9BT49 309 aaPredicted RBP11.14□□□□□ -0.63
FANCA-220ENST00000566409 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
FANCA-220ENST00000566409 IZUMO1RA6ND01 250 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 PPP5D1E7EU14 171 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 UPK2O00526 184 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 S1PR2O95136 353 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 HPRT1P00492 218 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 REG1AP05451 166 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 CTRB1P17538 263 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 ELK1P19419 428 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 PSMB6P28072 239 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 TAS2R31P59538 309 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 OR2B8PP59922 312 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 SLC25A42Q86VD7 318 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 OR4A5Q8NH83 315 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 SIGLEC8Q9NYZ4 499 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 S4R3C0 116 aa11.13□□□□□ -0.63
FANCA-220ENST00000566409 CSMD3Q7Z407 3707 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 HPGDSO60760 199 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 PGLYRP1O75594 196 aaPredicted RBP11.12□□□□□ -0.63
FANCA-220ENST00000566409 IGHV3-23P01764 117 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 HLA-AP01891 365 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms