RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PEF1Q9UBV8 284 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 A0A1B0GW64 132 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 HRASP01112 189 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 PMP2P02689 132 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 IL6RP08887 468 aaPredicted RBP15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 MYOD1P15172 320 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 RPL27AP46776 148 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 RFX2P48378 723 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 SYNJ2BPP57105 145 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 HERV-K104P61576 105 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 KLF5Q13887 457 aaPredicted RBP15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 TTC9CQ8N5M4 171 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 OR51H1Q8NH63 302 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 FYTTD1Q96QD9 318 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 ELOVL1Q9BW60 279 aa15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 NAA50Q9GZZ1 169 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-203ENST00000564272 E7EUB6 86 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 GP9P14770 177 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 PRSS3P35030 304 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 CATR1Q13166 79 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 EXOSC2Q13868 293 aaKnown RBP15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 OR4A47Q6IF82 309 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 OR5H2Q8NGV7 314 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 ASCL2Q99929 193 aa15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 ZNF2Q9BSG1 426 aaPredicted RBP15.28■□□□□ 0.04
SHCBP1-203ENST00000564272 TRBV9A0A0B4J1U6 114 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 FAM223BA6NKX1 122 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 RBFOX2O43251 390 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 OR2J3O76001 311 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 NAT1P18440 290 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 MAS1LP35410 378 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 TAS2R46P59540 309 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 ATP5G2Q06055 141 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 AADACL3Q5VUY0 350 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 FAM223AQ8IWN6 122 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 OR9G4Q8NGQ1 327 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 MOB3AQ96BX8 217 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 FXYD6Q9H0Q3 95 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 SMAD5-AS1Q9Y6J3 95 aa15.27■□□□□ 0.04
SHCBP1-203ENST00000564272 APOA1P02647 267 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 ZNF735P0CB33 412 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 AREGP15514 252 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 GNRHRP30968 328 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 RPL8P62917 257 aaKnown RBP15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 RPEL1Q2QD12 228 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 SLC25A42Q86VD7 318 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 HRASLSQ9HDD0 168 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 BET1LQ9NYM9 111 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 ZNF257Q9Y2Q1 563 aa15.26■□□□□ 0.03
SHCBP1-203ENST00000564272 DPPA5A6NC42 116 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 NPIPB5A8MRT5 1133 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 BMPR1BO00238 502 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 HPGDSO60760 199 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 S1PR2O95136 353 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 IGLV1-51P01701 117 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 HLA-GP17693 338 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 ELK1P19419 428 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 HLA-DMAP28067 261 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 HRH1P35367 487 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 TAS2R31P59538 309 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 C15orf32Q32M92 178 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 DHRS11Q6UWP2 260 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 IL34Q6ZMJ4 242 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 ANKRD13BQ86YJ7 626 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 SNX29P2Q8IUI4 249 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 NECAP1Q8NC96 275 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 OR4A5Q8NH83 315 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 GPX8Q8TED1 209 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 SLC2A9Q9NRM0 540 aa15.25■□□□□ 0.03
SHCBP1-203ENST00000564272 TRAV3A0A0B4J244 114 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 CGB1A6NKQ9 187 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 GABARAPO95166 117 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 HPRT1P00492 218 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 RLN1P04808 185 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 REG1AP05451 166 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 NHLRC4P0CG21 123 aaPredicted RBP15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 RORCP51449 518 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 CTF1Q16619 201 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 LYSMD2Q8IV50 215 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 CMTM3Q96MX0 182 aa15.24■□□□□ 0.03
SHCBP1-203ENST00000564272 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 SMIM31A0A1B0GVY4 71 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 RPA2P15927 270 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 NQO2P16083 231 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 PSMB6P28072 239 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 POU2AF1Q16633 256 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 BORCS5Q969J3 196 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 AIFM2Q9BRQ8 373 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 TMEM140Q9NV12 185 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 FBXL7Q9UJT9 491 aa15.23■□□□□ 0.03
SHCBP1-203ENST00000564272 UPK2O00526 184 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 PGLYRP1O75594 196 aaPredicted RBP15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 IGHV3-23P01764 117 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 CSN3P07498 182 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 OR2B8PP59922 312 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 GPR107Q5VW38 600 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 DMBX1Q8NFW5 382 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 CD300LFQ8TDQ1 290 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 FANCD2OSQ96PS1 177 aa15.22■□□□□ 0.03
SHCBP1-203ENST00000564272 PLEKHA2Q9HB19 425 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms