RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.9□□□□□ -0.82
ABCA3-203ENST00000563623 NPPCP23582 126 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 RNPS1Q15287 305 aaKnown RBP9.9□□□□□ -0.82
ABCA3-203ENST00000563623 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 TAAR6Q96RI8 345 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 ALKBH7Q9BT30 221 aaPredicted RBP9.9□□□□□ -0.82
ABCA3-203ENST00000563623 HTD2P86397 168 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 ACTL10Q5JWF8 245 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 LINC01551Q86U37 167 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 ABHD12Q8N2K0 398 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 OR10G8Q8NGN5 311 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 HIPK2Q9H2X6 1198 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 FRYQ5TBA9 3013 aa9.9□□□□□ -0.83
ABCA3-203ENST00000563623 SPINT2O43291 252 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 SLC35B1P78383 322 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 FBXW9Q5XUX1 488 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 OOEPA6NGQ2 149 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 NTN3O00634 580 aaPredicted RBP9.89□□□□□ -0.83
ABCA3-203ENST00000563623 RBX1P62877 108 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 RNASEH2CQ8TDP1 164 aaKnown RBP9.89□□□□□ -0.83
ABCA3-203ENST00000563623 VN1R17PQ8TDU5 208 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 PYGO2Q9BRQ0 406 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 SERTAD4Q9NUC0 356 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 NUPR1O60356 82 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 CLDN14O95500 239 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 IL18BPO95998 194 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 IER3P46695 156 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 KRTDAPP60985 99 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 GAGE1Q13065 139 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 TMEM164Q5U3C3 297 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 GBGT1Q8N5D6 347 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 TXN2Q99757 166 aa9.89□□□□□ -0.83
ABCA3-203ENST00000563623 LINC00473A8K010 186 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 FCN1O00602 326 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 PDE6DO43924 150 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 CRISP2P16562 243 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 ADMP35318 185 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 TCL1AP56279 114 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 SFRP2Q96HF1 295 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 HSPB9Q9BQS6 159 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 ENY2Q9NPA8 101 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 DUSP13Q9UII6 198 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 HPRT1P00492 218 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 MPV17P39210 176 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 PSG7Q13046 419 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 ERASQ7Z444 233 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 OR13A1Q8NGR1 328 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 CORO2AQ92828 525 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 PXMP4Q9Y6I8 212 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 RAB29O14966 203 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 VENTXO95231 258 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 OR9G9P0C7N8 305 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 BCL2L2Q92843 193 aaPredicted RBP9.88□□□□□ -0.83
ABCA3-203ENST00000563623 BDP1A6H8Y1 2624 aa9.88□□□□□ -0.83
ABCA3-203ENST00000563623 OR10J1P30954 320 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 TPPP2P59282 170 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
ABCA3-203ENST00000563623 KIAA1644Q3SXP7 199 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 LEAP2Q969E1 77 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 UHRF2Q96PU4 802 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 FREM2Q5SZK8 3169 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 KLRC4-KLRK1H3BQV0 150 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 M0QZ24 198 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 RBFOX2O43251 390 aaKnown RBP eCLIP9.87□□□□□ -0.83
ABCA3-203ENST00000563623 COL8A2P25067 703 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 ACSF3Q4G176 576 aaPredicted RBP9.87□□□□□ -0.83
ABCA3-203ENST00000563623 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 NPIPB11E5RHQ5 1161 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 RRHO14718 337 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 ZBTB34Q8NCN2 500 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 OR4P4Q8NGL7 312 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 C5orf30Q96GV9 206 aa9.87□□□□□ -0.83
ABCA3-203ENST00000563623 TRGV5A0A0B4J1U4 118 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
ABCA3-203ENST00000563623 MS4A5Q9H3V2 200 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 POLR3KQ9Y2Y1 108 aaPredicted RBP9.86□□□□□ -0.83
ABCA3-203ENST00000563623 C15orf62A8K5M9 175 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 SNURFLB1AK76 121 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 RPL39P5Q59GN2 51 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 ATP1A1-AS1Q5TC04 95 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 KLF14Q8TD94 323 aaPredicted RBP9.86□□□□□ -0.83
ABCA3-203ENST00000563623 BTF3L4Q96K17 158 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 PLEKHA3Q9HB20 300 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 MBNL3Q9NUK0 354 aaKnown RBP9.86□□□□□ -0.83
ABCA3-203ENST00000563623 IGHV3OR15-7A0A075B7D8 119 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 CD46P15529 392 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 PMCHP20382 165 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 LCN2P80188 198 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 ZNF596Q8TC21 504 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 LRRC29Q8WV35 223 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 TRIB1Q96RU8 372 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 VAMP8Q9BV40 100 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 MRPL18Q9H0U6 180 aaKnown RBP9.86□□□□□ -0.83
ABCA3-203ENST00000563623 KCNIP2Q9NS61 270 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 KLF13Q9Y2Y9 288 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms