RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 AP4M1O00189 453 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 CNIH1O95406 144 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 H2AFB2P0C5Z0 115 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 ANXA7P20073 488 aaKnown RBP14.89□□□□□ -0.03
RAB40C-207ENST00000563109 MDKP21741 143 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-207ENST00000563109 SUPT4H1P63272 117 aaKnown RBP14.89□□□□□ -0.03
RAB40C-207ENST00000563109 PPP1R1AQ13522 171 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 TMEM95Q3KNT9 176 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 C4orf46Q504U0 113 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 H2BFWTQ7Z2G1 175 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 TMEM167AQ8TBQ9 72 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 GLYATL2Q8WU03 294 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 OR51J1Q9H342 316 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 ZNF430Q9H8G1 570 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-207ENST00000563109 PARP11Q9NR21 331 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 RNF114Q9Y508 228 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 MMP24Q9Y5R2 645 aa14.89□□□□□ -0.03
RAB40C-207ENST00000563109 FCN1O00602 326 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 SFT2D2O95562 160 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 CDS2O95674 445 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 IGKV1-39P01597 117 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 HLA-AP01891 365 aaKnown RBP14.88□□□□□ -0.03
RAB40C-207ENST00000563109 IGKV1D-39P04432 117 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 CX3CL1P78423 397 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 TMEM187Q14656 261 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 TNXAQ16473 311 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 TMEM268Q5VZI3 342 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 PLET1Q6UQ28 207 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 ZNF562Q6V9R5 426 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 NRARPQ7Z6K4 114 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 LGI3Q8N145 548 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 CASTOR1Q8WTX7 329 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 ARPC1AQ92747 370 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 RBPMSQ93062 196 aaKnown RBP14.88□□□□□ -0.03
RAB40C-207ENST00000563109 IL22RA2Q969J5 263 aa14.88□□□□□ -0.03
RAB40C-207ENST00000563109 RRNAD1Q96FB5 475 aaKnown RBP14.88□□□□□ -0.03
RAB40C-207ENST00000563109 SNAPC5O75971 98 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 OR4E1P0C645 316 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 MAS1LP35410 378 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 RAB25P57735 213 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 RPL8P62917 257 aaKnown RBP14.87□□□□□ -0.03
RAB40C-207ENST00000563109 PJVKQ0ZLH3 352 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 FXYD3Q14802 87 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 AWAT1Q58HT5 328 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 CADM3Q8N126 398 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 DUSP18Q8NEJ0 188 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 GRPEL2Q8TAA5 225 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 SEC22AQ96IW7 307 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 TMEM56Q96MV1 263 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 SERTAD4Q9NUC0 356 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 TMEM56-RWDD3S4R434 201 aa14.87□□□□□ -0.03
RAB40C-207ENST00000563109 UPK2O00526 184 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 ATP6V0E1O15342 81 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 PTTG1O95997 202 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 VDAC1P21796 283 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 LYG2Q86SG7 212 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 SELENOHQ8IZQ5 122 aaKnown RBP14.86□□□□□ -0.03
RAB40C-207ENST00000563109 CHPT1Q8WUD6 406 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 GON7Q9BXV9 100 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 ALX4Q9H161 411 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-207ENST00000563109 PRR13Q9NZ81 148 aa14.86□□□□□ -0.03
RAB40C-207ENST00000563109 C9orf170A2RU37 121 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 HAX1O00165 279 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 IGKV1-5P01602 117 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 FGF2P09038 288 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 HLA-GP17693 338 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 NDPQ00604 133 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 DHRS2Q13268 280 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 FAM219AQ8IW50 185 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 STPG2Q8N412 459 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 KLHDC1Q8N7A1 406 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 OR4A16Q8NH70 328 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 COQ8AQ8NI60 647 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 LHFPL5Q8TAF8 219 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 PHB2Q99623 299 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 ZNF580Q9UK33 172 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 PRNDQ9UKY0 176 aa14.85□□□□□ -0.03
RAB40C-207ENST00000563109 DUXBA0A1W2PPF3 345 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 LINC01548A6NM66 108 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 RBMXL2O75526 392 aaKnown RBP14.84□□□□□ -0.03
RAB40C-207ENST00000563109 IGF1P05019 195 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 OR9G9P0C7N8 305 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 RPL27AP46776 148 aaKnown RBP14.84□□□□□ -0.03
RAB40C-207ENST00000563109 COMPP49747 757 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-207ENST00000563109 MECP2P51608 486 aaKnown RBP14.84□□□□□ -0.03
RAB40C-207ENST00000563109 PROK1P58294 105 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 SLC35B1P78383 322 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 ECSCRQ19T08 205 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 ANKRD55Q3KP44 614 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 KRTAP21-3Q3LHN1 58 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 C12orf54Q6X4T0 127 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 SLC35G3Q8N808 338 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 SRSF12Q8WXF0 261 aaKnown RBP14.84□□□□□ -0.03
RAB40C-207ENST00000563109 NOL4LQ96MY1 436 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-207ENST00000563109 COMMD5Q9GZQ3 224 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 FKBP11Q9NYL4 201 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 LINC00527Q9UJ94 153 aa14.84□□□□□ -0.03
RAB40C-207ENST00000563109 TRAV3A0A0B4J244 114 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 TRAV41A0A0B4J266 112 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 A0A0B4J2A0 478 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms