RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 CITED1Q99966 193 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 PARP11Q9NR21 331 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 NUBP2Q9Y5Y2 271 aa12.89□□□□□ -0.35
USB1-204ENST00000561568 MARCH11A6NNE9 402 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 UPK1BO75841 260 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 NDUFB6O95139 128 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 FGF2P09038 288 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 AKR1C4P17516 323 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 CCR6P51684 374 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 CRIP2P52943 208 aaPredicted RBP12.88□□□□□ -0.35
USB1-204ENST00000561568 GNB1P62873 340 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 MRGPRG-AS1Q2M3A8 158 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 SP6Q3SY56 376 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 TMEM128Q5BJH2 165 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 ADAD2Q8NCV1 583 aaKnown RBP12.88□□□□□ -0.35
USB1-204ENST00000561568 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
USB1-204ENST00000561568 ZNF430Q9H8G1 570 aaPredicted RBP12.88□□□□□ -0.35
USB1-204ENST00000561568 TRAV41A0A0B4J266 112 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 PIGBOS1A0A0B4J2F0 54 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 UPK2O00526 184 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 CDS2O95674 445 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 EGR2P11161 476 aaPredicted RBP12.87□□□□□ -0.35
USB1-204ENST00000561568 ANXA3P12429 323 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 UCP1P25874 307 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 G6PCP35575 357 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 KRTAP10-3P60369 221 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 TNXAQ16473 311 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 TRIM16LQ309B1 348 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 MZT2BQ6NZ67 158 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 TEX38Q6PEX7 206 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 TMED4Q7Z7H5 227 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 GLYATL2Q8WU03 294 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 TMEM140Q9NV12 185 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
USB1-204ENST00000561568 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 ARPC1BO15143 372 aaKnown RBP12.86□□□□□ -0.35
USB1-204ENST00000561568 FBXO24O75426 580 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 SNAPC5O75971 98 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
USB1-204ENST00000561568 H2BFWTQ7Z2G1 175 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 ZNF329Q86UD4 541 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 CENPSQ8N2Z9 138 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 SEC22AQ96IW7 307 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 TSC22D3Q99576 134 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 FKBP11Q9NYL4 201 aa12.86□□□□□ -0.35
USB1-204ENST00000561568 G3V318 75 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 IGHG4P01861 327 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 HLA-GP17693 338 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 PPIFP30405 207 aaKnown RBP12.85□□□□□ -0.35
USB1-204ENST00000561568 SLC6A1P30531 599 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 BTCP35070 178 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
USB1-204ENST00000561568 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
USB1-204ENST00000561568 CD83Q01151 205 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 SRSF4Q08170 494 aaKnown RBP12.85□□□□□ -0.35
USB1-204ENST00000561568 ASAH1Q13510 395 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 UNQ5815/PRO19632Q6UWF5 114 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 SLC25A42Q86VD7 318 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 ZNF695Q8IW36 515 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 MINDY2Q8NBR6 621 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 LFNGQ8NES3 379 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 GRPEL2Q8TAA5 225 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 SRSF12Q8WXF0 261 aaKnown RBP12.85□□□□□ -0.35
USB1-204ENST00000561568 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 COMMD5Q9GZQ3 224 aa12.85□□□□□ -0.35
USB1-204ENST00000561568 OPN1MWP04001 364 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 ELANEP08246 267 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 CD28P10747 220 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 NDPQ00604 133 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 CFHR3Q02985 330 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 FOXE3Q13461 319 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 OR5M8Q8NGP6 311 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 IL22RA2Q969J5 263 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
USB1-204ENST00000561568 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 PHB2Q99623 299 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 FAM103A1Q9BTL3 118 aaKnown RBP12.84□□□□□ -0.35
USB1-204ENST00000561568 ZFP57Q9NU63 452 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 FBXO7Q9Y3I1 522 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 TMEM56-RWDD3S4R434 201 aa12.84□□□□□ -0.35
USB1-204ENST00000561568 FAM240BA0A1B0GVZ2 78 aa12.83□□□□□ -0.36
USB1-204ENST00000561568 TCRBV4S1A1TA0A5B7 111 aa12.83□□□□□ -0.36
USB1-204ENST00000561568 TCRBP04435 133 aa12.83□□□□□ -0.36
USB1-204ENST00000561568 RPL27AP46776 148 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms