RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	KCTD9	Q7L273	389 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	OVCH2	Q7RTZ1	564 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	TEX45	Q8NA69	505 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	ADAD2	Q8NCV1	583 aa	Known RBP	5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	SRSF12	Q8WXF0	261 aa	Known RBP	5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	SNAPC3	Q92966	411 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	ADTRP	Q96IZ2	230 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	WWC2-AS2	Q96NR7	200 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	ZMAT5	Q9UDW3	170 aa	Known RBP	5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	ANXA10	Q9UJ72	324 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	RBMX2	Q9Y388	322 aa	Known RBP	5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	OR2W1	Q9Y3N9	320 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304		U3KQK5	164 aa		5.66	□□□□□ -1.5
ZEB1-223	ENST00000561304	TRAV18	A0A075B6X5	111 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	C13orf42	A0A1B0GVH6	325 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	MEIS3P1	A6NDR6	274 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	TNFSF12	O43508	249 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	RRAS	P10301	218 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	MYOD1	P15172	320 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	EDN2	P20800	178 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	AADAC	P22760	399 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	CBX3	Q13185	183 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	CDK10	Q15131	360 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	VMA21	Q3ZAQ7	101 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	ZNF343	Q6P1L6	599 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	CNIH2	Q6PI25	160 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	SBSPON	Q8IVN8	264 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	OSR1	Q8TAX0	266 aa	Predicted RBP	5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	ACOT12	Q8WYK0	555 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	PHB2	Q99623	299 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	DCSTAMP	Q9H295	470 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	COA4	Q9NYJ1	87 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	TAS2R8	Q9NYW2	309 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	SPATA2	Q9UM82	520 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	ETV7	Q9Y603	341 aa		5.65	□□□□□ -1.51
ZEB1-223	ENST00000561304	DNAH1	Q9P2D7	4330 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	HMX3	A6NHT5	357 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	CGB1	A6NKQ9	187 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	TEX22	C9J3V5	150 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	SCGN	O76038	276 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	KBTBD11	O94819	623 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	BRI3	O95415	125 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	IGLV1-51	P01701	117 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	OR9G9	P0C7N8	305 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	FRMD6-AS1	P0C7T7	363 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	SYNJ2BP	P57105	145 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	KLF5	Q13887	457 aa	Predicted RBP	5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	ARL6IP1	Q15041	203 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	PUSL1	Q8N0Z8	303 aa	Known RBP	5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304		Q8N1Y9	231 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	BEST4	Q8NFU0	473 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	OR6Q1	Q8NGQ2	317 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	OR13F1	Q8NGS4	319 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	SECTM1	Q8WVN6	248 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	TCTEX1D2	Q8WW35	142 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	YIPF6	Q96EC8	236 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	DCUN1D5	Q9BTE7	237 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	AUNIP	Q9H7T9	357 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	RANGRF	Q9HD47	186 aa	Predicted RBP	5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	AKIP1	Q9NQ31	210 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	CCL28	Q9NRJ3	127 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	SMAD5-AS1	Q9Y6J3	95 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	HYDIN	Q4G0P3	5121 aa		5.64	□□□□□ -1.51
ZEB1-223	ENST00000561304	TRBV9	A0A0B4J1U6	114 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304		A0A0G2JLM5	398 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	IZUMO1R	A6ND01	250 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	BMPR1B	O00238	502 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	PPY	P01298	95 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	CSN3	P07498	182 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	IL6R	P08887	468 aa	Predicted RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	CTXN2	P0C2S0	81 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	NHLRC4	P0CG21	123 aa	Predicted RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	ZP3	P21754	424 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	CD40LG	P29965	261 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	FCGR2C	P31995	323 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	RPS19	P39019	145 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	SCAND1	P57086	179 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	ARPC4	P59998	168 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	LSM3	P62310	102 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	SUMO1	P63165	101 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	RHOG	P84095	191 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	EXOSC2	Q13868	293 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	ADAMTSL5	Q6ZMM2	481 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	SSX9	Q7RTT3	188 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	HOGA1	Q86XE5	327 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	OR9G4	Q8NGQ1	327 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	OR4S2	Q8NH73	311 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	TMEM68	Q96MH6	324 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	OR4C12	Q96R67	309 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	HSD17B10	Q99714	261 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	THAP7	Q9BT49	309 aa	Predicted RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	PEF1	Q9UBV8	284 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	MRPS7	Q9Y2R9	242 aa	Known RBP	5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	DMRT1	Q9Y5R6	373 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304		S4R3C0	116 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304	ALMS1	Q8TCU4	4167 aa		5.63	□□□□□ -1.51
ZEB1-223	ENST00000561304		A0A0A6YYH2	397 aa		5.62	□□□□□ -1.51
ZEB1-223	ENST00000561304	TRAV3	A0A0B4J244	114 aa		5.62	□□□□□ -1.51
ZEB1-223	ENST00000561304		A6NJ64	397 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms