RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 COPZ2Q9P299 210 aa7.56□□□□□ -1.2
RABGGTA-221ENST00000561055 C14orf166Q9Y224 244 aaKnown RBP7.56□□□□□ -1.2
RABGGTA-221ENST00000561055 FBXO7Q9Y3I1 522 aa7.56□□□□□ -1.2
RABGGTA-221ENST00000561055 TRAV41A0A0B4J266 112 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 C3orf85A0A1B0GTC6 90 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 CRYM-AS1A6NIL9 109 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 S1PR2O95136 353 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 ELANEP08246 267 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 CD28P10747 220 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 PI3P19957 117 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 VDAC1P21796 283 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 UCP1P25874 307 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 PSMB8P28062 276 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 NDPQ00604 133 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 FOXE3Q13461 319 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 FXYD3Q14802 87 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 OR4A47Q6IF82 309 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 TEX38Q6PEX7 206 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 OR4X2Q8NGF9 303 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 ARPC1AQ92747 370 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 R3HDM4Q96D70 268 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 GALNT14Q96FL9 552 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 SEC22AQ96IW7 307 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 TP53RKQ96S44 253 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 CLCC1Q96S66 551 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 WDR12Q9GZL7 423 aaKnown RBP7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 ZFP57Q9NU63 452 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 VSIG4Q9Y279 399 aa7.55□□□□□ -1.2
RABGGTA-221ENST00000561055 TEX13DA0A0J9YY54 714 aaPredicted RBP7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 CENPXA8MT69 81 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 ADARB2-AS1A8MUL3 147 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 G3V318 75 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 UPK2O00526 184 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 PLA2G10O15496 165 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 CDS2O95674 445 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 IGKV1-39P01597 117 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 OPN1MWP04001 364 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 IGKV1D-39P04432 117 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 OPN1MW2P0DN77 364 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 OPN1MW3P0DN78 364 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 INPP1P49441 399 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 RPL8P62917 257 aaKnown RBP7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 DHODHQ02127 395 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 ZNF846Q147U1 533 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 RBMS2Q15434 407 aaKnown RBP7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 ZNF329Q86UD4 541 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 NDUFA11Q86Y39 141 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 VKORC1L1Q8N0U8 176 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 OR5M8Q8NGP6 311 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 MYOZ3Q8TDC0 251 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 GLYATL2Q8WU03 294 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 TMEM230Q96A57 120 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 TMEM222Q9H0R3 208 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 PARP11Q9NR21 331 aa7.54□□□□□ -1.2
RABGGTA-221ENST00000561055 H3BUA1 57 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 NDUFB6O95139 128 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 CNIH1O95406 144 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 KRASP01116 189 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SERPINE2P07093 398 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 P0C879 139 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SLC6A1P30531 599 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 BTCP35070 178 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 CDX1P47902 265 aaPredicted RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 ERVK-16P61578 105 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SUPT4H1P63272 117 aaKnown RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 TNXAQ16473 311 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 TMEM128Q5BJH2 165 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 ASPHD1Q5U4P2 390 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 LFNGQ8NES3 379 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 DMBX1Q8NFW5 382 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 TSC22D3Q99576 134 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SPIN2AQ99865 258 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SPIN2BQ9BPZ2 258 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 SRSF8Q9BRL6 282 aaKnown RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 TMEM140Q9NV12 185 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 FOXA2Q9Y261 457 aaPredicted RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 KCNIP3Q9Y2W7 256 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 TSSC4Q9Y5U2 329 aaPredicted RBP7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 WSB1Q9Y6I7 421 aa7.53□□□□□ -1.2
RABGGTA-221ENST00000561055 TRAV3A0A0B4J244 114 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 TCRBV4S1A1TA0A5B7 111 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 MSGN1A6NI15 193 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 CGB1A6NKQ9 187 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 E7EUB6 86 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 LYRM1O43325 122 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 SOX15O60248 233 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 UPK1BO75841 260 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 ACTL6BO94805 426 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 ATG12O94817 140 aa7.52□□□□□ -1.21
RABGGTA-221ENST00000561055 HLA-GP17693 338 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms