RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 PEF1Q9UBV8 284 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 POMPQ9Y244 141 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 MED31Q9Y3C7 131 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 RHBDD3Q9Y3P4 386 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 NUBP2Q9Y5Y2 271 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 TCRBV3S1A0A5B6 114 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 LOC110117498-PIK3R3F6TDL0 507 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 H7C1C5 153 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 SLC17A2O00624 439 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 HSD17B6O14756 317 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CIB2O75838 187 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 MMP23AO75900 390 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 TNFAIP8O95379 198 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 IGHV3-11P01762 117 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 TRGV3P03979 118 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CT45A10P0DMU9 189 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 COX4I1P13073 169 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 MIFP14174 115 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 IDO1P14902 403 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PPIBP23284 216 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 IL3RAP26951 378 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 IFNA8P32881 189 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CDKN2CP42773 168 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PTGFRP43088 359 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 OR1E2P47887 323 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 HSPA13P48723 471 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 GPM6AP51674 278 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CMC4P56277 68 aaPredicted RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 TPPP2P59282 170 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CDC42P60953 191 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 LCN6P62502 163 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 GRB2P62993 217 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 MED21Q13503 144 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 GRK1Q15835 563 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 KCTD21Q4G0X4 260 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 MESTQ5EB52 335 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PRAMEF5Q5TYX0 476 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 C1orf146Q5VVC0 180 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 LIPKQ5VXJ0 399 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 LPCAT4Q643R3 524 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 HAGHLQ6PII5 290 aaPredicted RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 HACD2Q6Y1H2 254 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 OAFQ86UD1 273 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 ERI1Q8IV48 349 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF565Q8N9K5 539 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 OR10X1Q8NGY0 326 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 OR11H2Q8NH07 326 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PFN4Q8NHR9 129 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PYDC1Q8WXC3 89 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 EMG1Q92979 244 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CMTM5Q96DZ9 223 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF488Q96MN9 340 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PAIP2Q9BPZ3 127 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 THTPAQ9BU02 230 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 ANKRD60Q9BZ19 345 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 RERGLQ9H628 205 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 PARP11Q9NR21 331 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 AIG1Q9NVV5 245 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CNOT2Q9NZN8 540 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 CD300AQ9UGN4 299 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 B9D1Q9UPM9 204 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 SLC7A11Q9UPY5 501 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 RPL36Q9Y3U8 105 aaKnown RBP1.95□□□□□ -2.1
LRRC28-218ENST00000560236 SNX5Q9Y5X3 404 aa1.95□□□□□ -2.1
LRRC28-218ENST00000560236 IGHV7-81A0A0B4J1V7 117 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 MFSD2BA6NFX1 497 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 EFCAB9A8MZ26 197 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF878C9JN71 531 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 J3QT63 122 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 SDHDO14521 159 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 CHEK1O14757 476 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 SOX15O60248 233 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 E2F6O75461 281 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 NDUFB2O95178 105 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 CSN2P05814 226 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 IFI30P13284 250 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 DCKP27707 260 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 HSD11B1P28845 292 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 BLVRBP30043 206 aaPredicted RBP1.94□□□□□ -2.1
LRRC28-218ENST00000560236 PRKXP51817 358 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 TAS2R41P59536 307 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 PRKCDQ05655 676 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 ST3GAL3Q11203 375 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 IL24Q13007 206 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 KRR1Q13601 381 aaKnown RBP1.94□□□□□ -2.1
LRRC28-218ENST00000560236 EDDM3AQ14507 147 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 MMDQ15546 238 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 DUSP7Q16829 419 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 Q3ZCU0 254 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 ZBED5Q49AG3 693 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 LRRC23Q53EV4 343 aaPredicted RBP1.94□□□□□ -2.1
LRRC28-218ENST00000560236 KLHL12Q53G59 568 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 ACTBL2Q562R1 376 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 TMEM41BQ5BJD5 291 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 TTC32Q5I0X7 151 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 DDI2Q5TDH0 399 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF57Q68EA5 555 aaPredicted RBP1.94□□□□□ -2.1
LRRC28-218ENST00000560236 LINC00299Q6ZSB3 139 aa1.94□□□□□ -2.1
LRRC28-218ENST00000560236 FAM122BQ7Z309 247 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms