RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MRPS11P82912 194 aaKnown RBP9.08□□□□□ -0.96
SPG11-217ENST00000559511 ARFGEF3Q5TH69 2177 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 SLC35E3Q7Z769 313 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.08□□□□□ -0.96
SPG11-217ENST00000559511 OR10G9Q8NGN4 311 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 OR10G7Q8NGN6 311 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 OR52E5Q8NH55 327 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 VAX2Q9UIW0 290 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 SPTA1P02549 2419 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 C1orf196B1AJZ1 125 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 FCN3O75636 299 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 IFNA10P01566 189 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 AGAP20933 346 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 TMEM170AQ8WVE7 144 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
SPG11-217ENST00000559511 CORO2AQ92828 525 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 HEYLQ9NQ87 328 aaPredicted RBP9.07□□□□□ -0.96
SPG11-217ENST00000559511 DCHS2Q6V1P9 2916 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 TNCP24821 2201 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 A0A087WWC5 75 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 CTXND1A0A1B0GTU2 59 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 PRSS46E5RG02 174 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 NDUFB7P17568 137 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 CD1BP29016 333 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 MAS1LP35410 378 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 RPL35P42766 123 aaKnown RBP9.07□□□□□ -0.96
SPG11-217ENST00000559511 THBS3P49746 956 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 CD81P60033 236 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 ABHD12Q8N2K0 398 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 ST6GALNAC3Q8NDV1 305 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 RHOVQ96L33 236 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 P2RX4Q99571 388 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 TCF19Q9Y242 345 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 WDR83OSQ9Y284 106 aa9.07□□□□□ -0.96
SPG11-217ENST00000559511 CHD8Q9HCK8 2581 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 C15orf61A6NNL5 157 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 MBP02144 154 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 AKR1D1P51857 326 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 CASP6P55212 293 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 ZNF343Q6P1L6 599 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 HEPN1Q6WQI6 88 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 ZNF709Q8N972 641 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 GATAD1Q8WUU5 269 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 RAB24Q969Q5 203 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 DIRC2Q96SL1 478 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 SAP30LQ9HAJ7 183 aa9.06□□□□□ -0.96
SPG11-217ENST00000559511 SLC25A10Q9UBX3 287 aaPredicted RBP9.06□□□□□ -0.96
SPG11-217ENST00000559511 RPUSD1Q9UJJ7 312 aaKnown RBP9.06□□□□□ -0.96
SPG11-217ENST00000559511 hADV38S2A0JD32 116 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 NKX6-3A6NJ46 265 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 SHISA9B4DS77 424 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 IFNA1P01562 189 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 MYOD1P15172 320 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 HOXA1P49639 335 aaPredicted RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 SNRPEP62304 92 aaKnown RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 GCSAMLQ5JQS6 135 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 NCMAPQ5T1S8 102 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 SLC25A48Q6ZT89 311 aaKnown RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 NEUROG1Q92886 237 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 ACTR3CQ9C0K3 210 aaPredicted RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 NGBQ9NPG2 151 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 LINC00312Q9Y6C7 94 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 TRAV38-1A0A0B4J264 116 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 SMCO3A2RU48 225 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 C17orf112F2Z3M2 114 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 CCL21O00585 134 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 LY86O95711 162 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 CT45A6P0DMU7 189 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 CT45A5P0DMU8 189 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 CT45A7P0DMV0 189 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 CCL3L1P16619 93 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 RPP30P78346 268 aaKnown RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 MEF2BQ02080 365 aaPredicted RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 ELOBQ15370 118 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 WDR25Q64LD2 544 aaPredicted RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 TREML4Q6UXN2 200 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 RBMS3Q6XE24 437 aaKnown RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 MALSU1Q96EH3 234 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 ADTRPQ96IZ2 230 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 TMEM14BQ9NUH8 114 aa9.05□□□□□ -0.96
SPG11-217ENST00000559511 FOXA2Q9Y261 457 aaPredicted RBP9.05□□□□□ -0.96
SPG11-217ENST00000559511 FAM90A27PA6NNH2 459 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 IGKV1-16P04430 117 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 CXCL1P09341 107 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 RPL31P62899 125 aaKnown RBP9.04□□□□□ -0.96
SPG11-217ENST00000559511 Q8WTZ3 238 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 CCL17Q92583 94 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 MS4A5Q9H3V2 200 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 URGCP-MRPS24S4R325 110 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 TACC2O95359 2948 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 COL6A6A6NMZ7 2263 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 PPIAL4EA0A075B759 164 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 C5orf52A6NGY3 159 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms