RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 SLC25A17O43808 307 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 KBTBD11O94819 623 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 OR2A4O95047 310 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 SERPINE2P07093 398 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 SRPXP78539 464 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 PRSS8Q16651 343 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 RGS21Q2M5E4 152 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 VMA21Q3ZAQ7 101 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 C19orf54Q5BKX5 351 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 NMSQ5H8A3 153 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 PLET1Q6UQ28 207 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 OR4A5Q8NH83 315 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 VSTM2AQ8TAG5 236 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 CHPT1Q8WUD6 406 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 OR2A7Q96R45 310 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 NPFFR1Q9GZQ6 430 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-207ENST00000559309 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 INMT-MINDY4F8WBC2 141 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 UPK2O00526 184 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 PLXNB1O43157 2135 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 PRAF2O60831 178 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 HLA-AP01891 365 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 IGF1P05019 195 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 HKR1P10072 659 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 EGR2P11161 476 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 ANXA3P12429 323 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 NDPQ00604 133 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 SRSF2Q01130 221 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 PJVKQ0ZLH3 352 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 LIN54Q6MZP7 749 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 ZNF430Q9H8G1 570 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
SNRPA1-207ENST00000559309 TRAV3A0A0B4J244 114 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 NCBP2LA6PVI3 153 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 SNRPGP15A8MWD9 76 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 KRASP01116 189 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 OR9G9P0C7N8 305 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 VDAC1P21796 283 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 G6PCP35575 357 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 TMEM268Q5VZI3 342 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 Q6ZRM9 215 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 FOXRED2Q8IWF2 684 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 LGI3Q8N145 548 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 SLC35G3Q8N808 338 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 OR52B4Q8NGK2 314 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 ZNF431Q8TF32 576 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 WNT10AQ9GZT5 417 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 TMEM14BQ9NUH8 114 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 PRR13Q9NZ81 148 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 MMP24Q9Y5R2 645 aa11.69□□□□□ -0.54
SNRPA1-207ENST00000559309 PIGBOS1A0A0B4J2F0 54 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 A0A1B0GW64 132 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 CGB1A6NKQ9 187 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 VAMP1P23763 118 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 MAS1LP35410 378 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 CX3CL1P78423 397 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 PDLIM3Q53GG5 364 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 LYZL2Q7Z4W2 148 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 ZNF429Q86V71 674 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 MMD2Q8IY49 270 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 MINDY2Q8NBR6 621 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 RASL11BQ9BPW5 248 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 SEC22CQ9BRL7 303 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 PRSS22Q9GZN4 317 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 FBXO7Q9Y3I1 522 aa11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 TET2Q6N021 2002 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-207ENST00000559309 TMEM89A2RUT3 159 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 SH2D7A6NKC9 451 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 C15orf61A6NNL5 157 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 E7EUB6 86 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 PITX3O75364 302 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 ATG12O94817 140 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 CA2P00918 260 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 SLC25A6P12236 298 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 HLA-GP17693 338 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 COMPP49747 757 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 CFHR3Q02985 330 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 TRIM16LQ309B1 348 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 C4orf46Q504U0 113 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 SSX9Q7RTT3 188 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 TAF15Q92804 592 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 OR51J1Q9H342 316 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 BEX1Q9HBH7 125 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 FOXA2Q9Y261 457 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms