RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 MZT2AQ6P582 158 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 IDO2Q6ZQW0 420 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 RBPMS2Q6ZRY4 209 aaKnown RBP3.98□□□□□ -1.77
LRRC28-208ENST00000558771 C19orf35Q6ZS72 473 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 C6orf201Q7Z4U5 140 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 SLC38A6Q8IZM9 456 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 NECAP1Q8NC96 275 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 OR52I1Q8NGK6 324 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 PTX4Q96A99 478 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 NEDD4LQ96PU5 975 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 RARRES2Q99969 163 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 C11orf68Q9H3H3 251 aaKnown RBP3.98□□□□□ -1.77
LRRC28-208ENST00000558771 CHMP1AQ9HD42 196 aaPredicted RBP3.98□□□□□ -1.77
LRRC28-208ENST00000558771 AMBNQ9NP70 447 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 ZNF221Q9UK13 617 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 EXOSC1Q9Y3B2 195 aaKnown RBP3.98□□□□□ -1.77
LRRC28-208ENST00000558771 S4R3C0 116 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
LRRC28-208ENST00000558771 A0A1W2PPK0 400 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 SAC3D1A6NKF1 404 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 M0R2N4 97 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 DYNC1I1O14576 645 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 DEFB4AO15263 64 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 OGG1O15527 345 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 SCTP09683 121 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 C8orf88P0DMB2 117 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 BTF3P20290 206 aaKnown RBP3.97□□□□□ -1.77
LRRC28-208ENST00000558771 UBE2KP61086 200 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 RPS11P62280 158 aaKnown RBP eCLIP3.97□□□□□ -1.77
LRRC28-208ENST00000558771 GNGT1P63211 74 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 HLA-DRB3P79483 266 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 VMA21Q3ZAQ7 101 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 Q499Y3 187 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 CCDC58Q4VC31 144 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 ZNF585BQ52M93 769 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 C10orf55Q5SWW7 151 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 OR2G6Q5TZ20 316 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 OR4A47Q6IF82 309 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 CLEC19AQ6UXS0 136 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 UNQ9165/PRO28630Q6UXU0 137 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 MOB1BQ7L9L4 216 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 CDH26Q8IXH8 852 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 TTC9CQ8N5M4 171 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 TEX45Q8NA69 505 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 OR11H2Q8NH07 326 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 ACOT12Q8WYK0 555 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 MARC2Q969Z3 335 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 SMIM19Q96E16 107 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 GALNT14Q96FL9 552 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 C5orf30Q96GV9 206 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 SPAG8Q99932 426 aaPredicted RBP3.97□□□□□ -1.77
LRRC28-208ENST00000558771 NICN1Q9BSH3 213 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 HDHD3Q9BSH5 251 aaPredicted RBP3.97□□□□□ -1.77
LRRC28-208ENST00000558771 MAP6D1Q9H9H5 199 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 CKLFQ9UBR5 152 aa3.97□□□□□ -1.77
LRRC28-208ENST00000558771 TRBV5-7A0A0A0MS05 114 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 TRBV6-6A0A0A6YYG2 114 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 IGKV1-6A0A0C4DH72 117 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 HMX3A6NHT5 357 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 MPTX1A8MV57 137 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 C11orf94C9JXX5 98 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 TSPAN4O14817 238 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 GYG2O15488 501 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 ACTL6BO94805 426 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 LALBAP00709 142 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 NPSP0C0P6 89 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 HTR2CP28335 458 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 ETV1P50549 477 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 RPS27AP62979 156 aaKnown RBP3.96□□□□□ -1.78
LRRC28-208ENST00000558771 CBX3Q13185 183 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 MED21Q13503 144 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 MED22Q15528 200 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 DNAL1Q4LDG9 190 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 GLT8D1Q68CQ7 371 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 OR10K2Q6IF99 312 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 CEACAM19Q7Z692 300 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 SLC25A42Q86VD7 318 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 APRG1Q8IVJ8 170 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF645Q8N7E2 425 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.96□□□□□ -1.78
LRRC28-208ENST00000558771 OR5B3Q8NH48 314 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 CD300LFQ8TDQ1 290 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 PGLYRP3Q96LB9 341 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 SPIN2AQ99865 258 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 SPIN2BQ9BPZ2 258 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 CSTL1Q9H114 145 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 OR2D2Q9H210 308 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 C5orf66Q9H5L9 145 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF430Q9H8G1 570 aaPredicted RBP3.96□□□□□ -1.78
LRRC28-208ENST00000558771 SDHAF2Q9NX18 166 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 RDH8Q9NYR8 311 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 MRPL27Q9P0M9 148 aaKnown RBP3.96□□□□□ -1.78
LRRC28-208ENST00000558771 GHRLQ9UBU3 117 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 AK3Q9UIJ7 227 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF257Q9Y2Q1 563 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 AP4S1Q9Y587 144 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
LRRC28-208ENST00000558771 IGHV4-4A0A075B6R2 117 aa3.95□□□□□ -1.78
LRRC28-208ENST00000558771 A0A0A6YYD4 124 aa3.95□□□□□ -1.78
LRRC28-208ENST00000558771 IGHV3-35A0A0C4DH35 117 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms