RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 IGKV1-39P01597 117 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 OPN1MWP04001 364 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 IGKV1D-39P04432 117 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 PPIFP30405 207 aaKnown RBP12.14□□□□□ -0.47
LINC01220-201ENST00000558575 CD83Q01151 205 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 SURF2Q15527 256 aaPredicted RBP12.14□□□□□ -0.47
LINC01220-201ENST00000558575 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 CD300LFQ8TDQ1 290 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 CHPT1Q8WUD6 406 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 FAM103A1Q9BTL3 118 aaKnown RBP12.14□□□□□ -0.47
LINC01220-201ENST00000558575 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
LINC01220-201ENST00000558575 PARP11Q9NR21 331 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 SCP2D1Q9UJQ7 156 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 DYNC2H1Q8NCM8 4307 aaKnown RBP12.13□□□□□ -0.47
LINC01220-201ENST00000558575 LINC00854A0A1B0GVQ3 168 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 PLA2G10O15496 165 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 OR2A4O95047 310 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 HRASP01112 189 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 RPA2P15927 270 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 CRIP2P52943 208 aaPredicted RBP12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TAS2R31P59538 309 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 FXYD3Q14802 87 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TRIQKQ629K1 86 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 OR4A47Q6IF82 309 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 POC5Q8NA72 575 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TMEM167AQ8TBQ9 72 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TMEM230Q96A57 120 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 OR2A7Q96R45 310 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
LINC01220-201ENST00000558575 FAM212BQ9NTI7 297 aaPredicted RBP12.13□□□□□ -0.47
LINC01220-201ENST00000558575 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
LINC01220-201ENST00000558575 SOX15O60248 233 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 FBXO24O75426 580 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 MYOD1P15172 320 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 NQO2P16083 231 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 FAUP35544 74 aaKnown RBP12.12□□□□□ -0.47
LINC01220-201ENST00000558575 ECI1P42126 302 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 SP6Q3SY56 376 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 R3HDM4Q96D70 268 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 BET1LQ9NYM9 111 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 COPZ2Q9P299 210 aa12.12□□□□□ -0.47
LINC01220-201ENST00000558575 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 A0A1B0GW64 132 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 E7EUB6 86 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 UPK2O00526 184 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 KBTBD11O94819 623 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 KRASP01116 189 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 S100GP29377 79 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 BTCP35070 178 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 CCR6P51684 374 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 GNB1P62873 340 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 OXLD1Q5BKU9 147 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 MMD2Q8IY49 270 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 COMMD9Q9P000 198 aa12.11□□□□□ -0.47
LINC01220-201ENST00000558575 C14orf166Q9Y224 244 aaKnown RBP12.11□□□□□ -0.47
LINC01220-201ENST00000558575 H0Y980 276 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 CNIH1O95406 144 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 IGHG4P01861 327 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 CD40LGP29965 261 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 G6PCP35575 357 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 KIAA0141Q14154 515 aaPredicted RBP12.1□□□□□ -0.47
LINC01220-201ENST00000558575 TNXAQ16473 311 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 AKIRIN2Q53H80 203 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 CADM3Q8N126 398 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 CCDC32Q9BV29 185 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 NAA60Q9H7X0 242 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
LINC01220-201ENST00000558575 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 CRYM-AS1A6NIL9 109 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 OR5AC1P0C628 307 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 VDAC1P21796 283 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 UCP1P25874 307 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 PSMB8P28062 276 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 INPP1P49441 399 aa12.09□□□□□ -0.47
LINC01220-201ENST00000558575 SUPT4H1P63272 117 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms