RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
AC012409.1-202ENST00000558449 BCL9O00512 1426 aa3.17□□□□□ -1.9
AC012409.1-202ENST00000558449 ALS2Q96Q42 1657 aa3.17□□□□□ -1.9
AC012409.1-202ENST00000558449 TRPM3Q9HCF6 1732 aaPredicted RBP3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 ANKRD26Q9UPS8 1709 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 RGPD8O14715 1765 aaPredicted RBP3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 IGKV3D-11A0A0A0MRZ8 115 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 A8MWP6 167 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 SSNA1O43805 119 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 CDK2P24941 298 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 PPP1CCP36873 323 aaKnown RBP3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 OR1E2P47887 323 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 HPCAP84074 193 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 TMEM267Q0VDI3 215 aaPredicted RBP3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 CST6Q15828 149 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 TAF9Q16594 264 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 TMEM31Q5JXX7 168 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 NOXRED1Q6NXP6 359 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 LMX1AQ8TE12 382 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 ITFG2Q969R8 447 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 OR8B2Q96RD0 313 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 DERL2Q9GZP9 239 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 OR51B6Q9H340 312 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 HDGFL3Q9Y3E1 203 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 SDK2Q58EX2 2172 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 ANKARQ7Z5J8 1434 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 RIF1Q5UIP0 2472 aaKnown RBP3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 CACNA1SQ13698 1873 aa3.16□□□□□ -1.9
AC012409.1-202ENST00000558449 PTPRZ1P23471 2315 aaPredicted RBP3.15□□□□□ -1.9
AC012409.1-202ENST00000558449 LMO7Q8WWI1 1683 aa3.15□□□□□ -1.9
AC012409.1-202ENST00000558449 FAM186AA6NE01 2351 aa3.15□□□□□ -1.9
AC012409.1-202ENST00000558449 SPTBN2O15020 2390 aa3.15□□□□□ -1.9
AC012409.1-202ENST00000558449 ZNF638Q14966 1978 aaKnown RBP3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 LINC00862A6NCI5 91 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 M0QZ92 97 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 STK16O75716 305 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 APOEP02649 317 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 TYMSP04818 313 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 IL6P05231 212 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 IGKV4-1P06312 121 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 C8orf88P0DMB2 117 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 CST9Q5W186 159 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 CCDC112Q8NEF3 446 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 CPSF1Q10570 1443 aaKnown RBP3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 SPG11Q96JI7 2443 aa3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 COL1A1P02452 1464 aaPredicted RBP3.15□□□□□ -1.91
AC012409.1-202ENST00000558449 ABCA2Q9BZC7 2435 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 BRD4O60885 1362 aaPredicted RBP3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 EIF3AQ14152 1382 aaKnown RBP3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 MON2Q7Z3U7 1717 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 TEX50A0A1B0GTY4 177 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 IGSF23A1L1A6 192 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 H0Y980 276 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 PFDN6O15212 129 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 DEDDO75618 318 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 IGLV3-27P01718 113 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 OR4A8P0C604 315 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 AKR1C2P52895 323 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 HERVK_113P63121 156 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 SLC35A2P78381 396 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 ACSBG2Q5FVE4 666 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 MSRB3Q8IXL7 192 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 TMBIM1Q969X1 311 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 FGFR1OP2Q9NVK5 253 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 LCTP09848 1927 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 SPTAN1Q13813 2472 aaKnown RBP3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 TAF1LQ8IZX4 1826 aa3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 SPENQ96T58 3664 aaKnown RBP3.14□□□□□ -1.91
AC012409.1-202ENST00000558449 DSCAML1Q8TD84 2053 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 TNS3Q68CZ2 1445 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 SMG6Q86US8 1419 aaKnown RBP3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 IGLV10-54A0A075B6I4 117 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 MRASO14807 208 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 SLC16A4O15374 487 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 CDS2O95674 445 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 CRYGDP07320 174 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 OPRM1P35372 400 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 CXCR4P61073 352 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 BRD3OSQ6XYD6 125 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 SDIM1Q6ZPB5 146 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 MFSD8Q8NHS3 518 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 CDCA4Q9BXL8 241 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 VPREB3Q9UKI3 123 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 POLR3HQ9Y535 204 aaPredicted RBP3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 V9GYY5 206 aaPredicted RBP3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 CHD7Q9P2D1 2997 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 UBR3Q6ZT12 1888 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 RP1L1Q8IWN7 2480 aaPredicted RBP3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 TJP1Q07157 1748 aa3.13□□□□□ -1.91
AC012409.1-202ENST00000558449 SSC5DA1L4H1 1573 aa3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 PDZD2O15018 2839 aa3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 PPIP5K1Q6PFW1 1433 aa3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 A0A1W2PNM2 257 aa3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 FGF12P61328 243 aa3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 UBE2IP63279 158 aaKnown RBP3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 PPP1R1AQ13522 171 aa3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 MRPL51Q4U2R6 128 aaKnown RBP3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 OGFRL1Q5TC84 451 aaPredicted RBP3.12□□□□□ -1.91
AC012409.1-202ENST00000558449 PTRHD1Q6GMV3 140 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms